Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3021 | 9286;9287;9288 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
N2AB | 3021 | 9286;9287;9288 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
N2A | 3021 | 9286;9287;9288 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
N2B | 2975 | 9148;9149;9150 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
Novex-1 | 2975 | 9148;9149;9150 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
Novex-2 | 2975 | 9148;9149;9150 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
Novex-3 | 3021 | 9286;9287;9288 | chr2:178768775;178768774;178768773 | chr2:179633502;179633501;179633500 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.991 | N | 0.678 | 0.197 | 0.571034400148 | gnomAD-4.0.0 | 1.5906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43275E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4772 | ambiguous | 0.5296 | ambiguous | -1.758 | Destabilizing | 0.953 | D | 0.555 | neutral | None | None | None | None | N |
L/C | 0.5727 | likely_pathogenic | 0.6467 | pathogenic | -0.828 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/D | 0.7911 | likely_pathogenic | 0.8312 | pathogenic | -1.628 | Destabilizing | 0.986 | D | 0.754 | deleterious | None | None | None | None | N |
L/E | 0.5831 | likely_pathogenic | 0.6417 | pathogenic | -1.653 | Destabilizing | 0.973 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/F | 0.1382 | likely_benign | 0.1744 | benign | -1.425 | Destabilizing | 0.991 | D | 0.678 | prob.neutral | N | 0.494406951 | None | None | N |
L/G | 0.5975 | likely_pathogenic | 0.6355 | pathogenic | -2.059 | Highly Destabilizing | 0.986 | D | 0.761 | deleterious | None | None | None | None | N |
L/H | 0.2525 | likely_benign | 0.3026 | benign | -1.392 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | N | 0.504327812 | None | None | N |
L/I | 0.2372 | likely_benign | 0.2929 | benign | -1.003 | Destabilizing | 0.322 | N | 0.183 | neutral | N | 0.505384125 | None | None | N |
L/K | 0.31 | likely_benign | 0.3566 | ambiguous | -1.215 | Destabilizing | 0.973 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/M | 0.1227 | likely_benign | 0.1409 | benign | -0.575 | Destabilizing | 0.993 | D | 0.652 | neutral | None | None | None | None | N |
L/N | 0.381 | ambiguous | 0.4199 | ambiguous | -0.966 | Destabilizing | 0.986 | D | 0.755 | deleterious | None | None | None | None | N |
L/P | 0.8468 | likely_pathogenic | 0.873 | pathogenic | -1.225 | Destabilizing | 0.991 | D | 0.756 | deleterious | N | 0.506132055 | None | None | N |
L/Q | 0.1884 | likely_benign | 0.2116 | benign | -1.215 | Destabilizing | 0.591 | D | 0.508 | neutral | None | None | None | None | N |
L/R | 0.236 | likely_benign | 0.2708 | benign | -0.539 | Destabilizing | 0.964 | D | 0.739 | prob.delet. | N | 0.439258229 | None | None | N |
L/S | 0.4405 | ambiguous | 0.5092 | ambiguous | -1.466 | Destabilizing | 0.986 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/T | 0.377 | ambiguous | 0.4327 | ambiguous | -1.39 | Destabilizing | 0.986 | D | 0.637 | neutral | None | None | None | None | N |
L/V | 0.2235 | likely_benign | 0.2716 | benign | -1.225 | Destabilizing | 0.76 | D | 0.541 | neutral | N | 0.493384545 | None | None | N |
L/W | 0.2854 | likely_benign | 0.3234 | benign | -1.536 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | None | None | None | None | N |
L/Y | 0.2646 | likely_benign | 0.3123 | benign | -1.318 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.