Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30211 | 90856;90857;90858 | chr2:178552269;178552268;178552267 | chr2:179416996;179416995;179416994 |
N2AB | 28570 | 85933;85934;85935 | chr2:178552269;178552268;178552267 | chr2:179416996;179416995;179416994 |
N2A | 27643 | 83152;83153;83154 | chr2:178552269;178552268;178552267 | chr2:179416996;179416995;179416994 |
N2B | 21146 | 63661;63662;63663 | chr2:178552269;178552268;178552267 | chr2:179416996;179416995;179416994 |
Novex-1 | 21271 | 64036;64037;64038 | chr2:178552269;178552268;178552267 | chr2:179416996;179416995;179416994 |
Novex-2 | 21338 | 64237;64238;64239 | chr2:178552269;178552268;178552267 | chr2:179416996;179416995;179416994 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1329290797 | 0.077 | 0.241 | N | 0.479 | 0.207 | 0.399889258716 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
C/R | rs1329290797 | 0.077 | 0.241 | N | 0.479 | 0.207 | 0.399889258716 | gnomAD-4.0.0 | 1.59183E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85889E-06 | 0 | 0 |
C/Y | None | None | 0.061 | N | 0.425 | 0.216 | 0.400033932507 | gnomAD-4.0.0 | 2.73727E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59817E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3417 | ambiguous | 0.308 | benign | -0.827 | Destabilizing | 0.001 | N | 0.079 | neutral | None | None | None | None | I |
C/D | 0.7536 | likely_pathogenic | 0.6344 | pathogenic | 0.32 | Stabilizing | 0.148 | N | 0.406 | neutral | None | None | None | None | I |
C/E | 0.8318 | likely_pathogenic | 0.7669 | pathogenic | 0.294 | Stabilizing | 0.148 | N | 0.358 | neutral | None | None | None | None | I |
C/F | 0.3392 | likely_benign | 0.2781 | benign | -0.713 | Destabilizing | 0.061 | N | 0.429 | neutral | N | 0.438102716 | None | None | I |
C/G | 0.1588 | likely_benign | 0.1317 | benign | -0.982 | Destabilizing | 0.028 | N | 0.318 | neutral | N | 0.225447217 | None | None | I |
C/H | 0.5259 | ambiguous | 0.4169 | ambiguous | -0.916 | Destabilizing | 0.001 | N | 0.245 | neutral | None | None | None | None | I |
C/I | 0.665 | likely_pathogenic | 0.6482 | pathogenic | -0.498 | Destabilizing | 0.001 | N | 0.157 | neutral | None | None | None | None | I |
C/K | 0.7746 | likely_pathogenic | 0.6991 | pathogenic | -0.157 | Destabilizing | 0.08 | N | 0.361 | neutral | None | None | None | None | I |
C/L | 0.5616 | ambiguous | 0.5521 | ambiguous | -0.498 | Destabilizing | 0.016 | N | 0.271 | neutral | None | None | None | None | I |
C/M | 0.6364 | likely_pathogenic | 0.6362 | pathogenic | -0.013 | Destabilizing | 0.749 | D | 0.339 | neutral | None | None | None | None | I |
C/N | 0.4182 | ambiguous | 0.3341 | benign | 0.184 | Stabilizing | 0.08 | N | 0.407 | neutral | None | None | None | None | I |
C/P | 0.9821 | likely_pathogenic | 0.9772 | pathogenic | -0.584 | Destabilizing | 0.46 | N | 0.479 | neutral | None | None | None | None | I |
C/Q | 0.6023 | likely_pathogenic | 0.5194 | ambiguous | 0.034 | Stabilizing | 0.296 | N | 0.461 | neutral | None | None | None | None | I |
C/R | 0.539 | ambiguous | 0.4253 | ambiguous | 0.203 | Stabilizing | 0.241 | N | 0.479 | neutral | N | 0.389367406 | None | None | I |
C/S | 0.2011 | likely_benign | 0.162 | benign | -0.301 | Destabilizing | 0.001 | N | 0.153 | neutral | N | 0.34925158 | None | None | I |
C/T | 0.3781 | ambiguous | 0.3333 | benign | -0.2 | Destabilizing | 0.036 | N | 0.279 | neutral | None | None | None | None | I |
C/V | 0.5075 | ambiguous | 0.5098 | ambiguous | -0.584 | Destabilizing | 0.001 | N | 0.145 | neutral | None | None | None | None | I |
C/W | 0.7219 | likely_pathogenic | 0.6457 | pathogenic | -0.655 | Destabilizing | 0.001 | N | 0.22 | neutral | N | 0.4086466 | None | None | I |
C/Y | 0.4007 | ambiguous | 0.3141 | benign | -0.562 | Destabilizing | 0.061 | N | 0.425 | neutral | N | 0.437929357 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.