Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30219 | 90880;90881;90882 | chr2:178552245;178552244;178552243 | chr2:179416972;179416971;179416970 |
N2AB | 28578 | 85957;85958;85959 | chr2:178552245;178552244;178552243 | chr2:179416972;179416971;179416970 |
N2A | 27651 | 83176;83177;83178 | chr2:178552245;178552244;178552243 | chr2:179416972;179416971;179416970 |
N2B | 21154 | 63685;63686;63687 | chr2:178552245;178552244;178552243 | chr2:179416972;179416971;179416970 |
Novex-1 | 21279 | 64060;64061;64062 | chr2:178552245;178552244;178552243 | chr2:179416972;179416971;179416970 |
Novex-2 | 21346 | 64261;64262;64263 | chr2:178552245;178552244;178552243 | chr2:179416972;179416971;179416970 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | None | None | 0.449 | N | 0.689 | 0.278 | 0.299086750705 | gnomAD-4.0.0 | 1.36876E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.31444E-05 |
V/I | None | None | 0.001 | N | 0.259 | 0.085 | 0.173771789658 | gnomAD-4.0.0 | 6.84382E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8424 | likely_pathogenic | 0.7859 | pathogenic | -1.824 | Destabilizing | 0.189 | N | 0.497 | neutral | N | 0.482957991 | None | None | N |
V/C | 0.9426 | likely_pathogenic | 0.9223 | pathogenic | -1.543 | Destabilizing | 0.962 | D | 0.685 | prob.neutral | None | None | None | None | N |
V/D | 0.9949 | likely_pathogenic | 0.9909 | pathogenic | -1.65 | Destabilizing | 0.623 | D | 0.739 | prob.delet. | N | 0.494821275 | None | None | N |
V/E | 0.9868 | likely_pathogenic | 0.9773 | pathogenic | -1.494 | Destabilizing | 0.687 | D | 0.671 | neutral | None | None | None | None | N |
V/F | 0.4067 | ambiguous | 0.341 | ambiguous | -1.117 | Destabilizing | 0.449 | N | 0.689 | prob.neutral | N | 0.493553828 | None | None | N |
V/G | 0.9389 | likely_pathogenic | 0.9043 | pathogenic | -2.318 | Highly Destabilizing | 0.623 | D | 0.718 | prob.delet. | N | 0.494821275 | None | None | N |
V/H | 0.9918 | likely_pathogenic | 0.9858 | pathogenic | -1.911 | Destabilizing | 0.962 | D | 0.761 | deleterious | None | None | None | None | N |
V/I | 0.0707 | likely_benign | 0.0671 | benign | -0.494 | Destabilizing | 0.001 | N | 0.259 | neutral | N | 0.489515758 | None | None | N |
V/K | 0.9894 | likely_pathogenic | 0.9807 | pathogenic | -1.513 | Destabilizing | 0.687 | D | 0.67 | neutral | None | None | None | None | N |
V/L | 0.2494 | likely_benign | 0.2176 | benign | -0.494 | Destabilizing | 0.016 | N | 0.396 | neutral | N | 0.43685663 | None | None | N |
V/M | 0.3306 | likely_benign | 0.2801 | benign | -0.556 | Destabilizing | 0.519 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/N | 0.9789 | likely_pathogenic | 0.9613 | pathogenic | -1.64 | Destabilizing | 0.87 | D | 0.748 | deleterious | None | None | None | None | N |
V/P | 0.9872 | likely_pathogenic | 0.9792 | pathogenic | -0.905 | Destabilizing | 0.87 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/Q | 0.9848 | likely_pathogenic | 0.9734 | pathogenic | -1.554 | Destabilizing | 0.87 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/R | 0.9826 | likely_pathogenic | 0.9691 | pathogenic | -1.277 | Destabilizing | 0.687 | D | 0.749 | deleterious | None | None | None | None | N |
V/S | 0.9558 | likely_pathogenic | 0.9285 | pathogenic | -2.362 | Highly Destabilizing | 0.687 | D | 0.675 | prob.neutral | None | None | None | None | N |
V/T | 0.8957 | likely_pathogenic | 0.8496 | pathogenic | -2.053 | Highly Destabilizing | 0.236 | N | 0.591 | neutral | None | None | None | None | N |
V/W | 0.9842 | likely_pathogenic | 0.9742 | pathogenic | -1.467 | Destabilizing | 0.962 | D | 0.743 | deleterious | None | None | None | None | N |
V/Y | 0.9427 | likely_pathogenic | 0.9032 | pathogenic | -1.105 | Destabilizing | 0.687 | D | 0.7 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.