Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30229 | 90910;90911;90912 | chr2:178552215;178552214;178552213 | chr2:179416942;179416941;179416940 |
N2AB | 28588 | 85987;85988;85989 | chr2:178552215;178552214;178552213 | chr2:179416942;179416941;179416940 |
N2A | 27661 | 83206;83207;83208 | chr2:178552215;178552214;178552213 | chr2:179416942;179416941;179416940 |
N2B | 21164 | 63715;63716;63717 | chr2:178552215;178552214;178552213 | chr2:179416942;179416941;179416940 |
Novex-1 | 21289 | 64090;64091;64092 | chr2:178552215;178552214;178552213 | chr2:179416942;179416941;179416940 |
Novex-2 | 21356 | 64291;64292;64293 | chr2:178552215;178552214;178552213 | chr2:179416942;179416941;179416940 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs1311556437 | -0.223 | 0.986 | N | 0.524 | 0.201 | 0.402899589544 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
K/E | rs1311556437 | -0.223 | 0.986 | N | 0.524 | 0.201 | 0.402899589544 | gnomAD-4.0.0 | 6.15936E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19672E-06 | 0 | 1.65711E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.1837 | likely_benign | 0.2071 | benign | -0.167 | Destabilizing | 0.863 | D | 0.453 | neutral | None | None | None | None | N |
K/C | 0.4224 | ambiguous | 0.4975 | ambiguous | -0.274 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
K/D | 0.5652 | likely_pathogenic | 0.6201 | pathogenic | 0.023 | Stabilizing | 0.997 | D | 0.547 | neutral | None | None | None | None | N |
K/E | 0.1452 | likely_benign | 0.1612 | benign | 0.093 | Stabilizing | 0.986 | D | 0.524 | neutral | N | 0.436052206 | None | None | N |
K/F | 0.63 | likely_pathogenic | 0.6954 | pathogenic | 0.011 | Stabilizing | 0.991 | D | 0.601 | neutral | None | None | None | None | N |
K/G | 0.3229 | likely_benign | 0.361 | ambiguous | -0.477 | Destabilizing | 0.99 | D | 0.528 | neutral | None | None | None | None | N |
K/H | 0.2874 | likely_benign | 0.3256 | benign | -0.781 | Destabilizing | 0.999 | D | 0.551 | neutral | None | None | None | None | N |
K/I | 0.175 | likely_benign | 0.2039 | benign | 0.607 | Stabilizing | 0.134 | N | 0.426 | neutral | N | 0.492828209 | None | None | N |
K/L | 0.2244 | likely_benign | 0.2583 | benign | 0.607 | Stabilizing | 0.759 | D | 0.442 | neutral | None | None | None | None | N |
K/M | 0.1552 | likely_benign | 0.1697 | benign | 0.311 | Stabilizing | 0.991 | D | 0.523 | neutral | None | None | None | None | N |
K/N | 0.3421 | ambiguous | 0.3759 | ambiguous | -0.075 | Destabilizing | 0.996 | D | 0.527 | neutral | N | 0.469260703 | None | None | N |
K/P | 0.8213 | likely_pathogenic | 0.8452 | pathogenic | 0.38 | Stabilizing | 0.997 | D | 0.555 | neutral | None | None | None | None | N |
K/Q | 0.1076 | likely_benign | 0.1213 | benign | -0.156 | Destabilizing | 0.996 | D | 0.523 | neutral | N | 0.419351957 | None | None | N |
K/R | 0.0711 | likely_benign | 0.0775 | benign | -0.366 | Destabilizing | 0.986 | D | 0.519 | neutral | N | 0.434070694 | None | None | N |
K/S | 0.2663 | likely_benign | 0.3081 | benign | -0.607 | Destabilizing | 0.969 | D | 0.503 | neutral | None | None | None | None | N |
K/T | 0.095 | likely_benign | 0.1023 | benign | -0.354 | Destabilizing | 0.92 | D | 0.49 | neutral | N | 0.393589508 | None | None | N |
K/V | 0.1364 | likely_benign | 0.1655 | benign | 0.38 | Stabilizing | 0.079 | N | 0.397 | neutral | None | None | None | None | N |
K/W | 0.7517 | likely_pathogenic | 0.8021 | pathogenic | 0.053 | Stabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
K/Y | 0.5767 | likely_pathogenic | 0.6322 | pathogenic | 0.352 | Stabilizing | 0.997 | D | 0.579 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.