Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3023490925;90926;90927 chr2:178552200;178552199;178552198chr2:179416927;179416926;179416925
N2AB2859386002;86003;86004 chr2:178552200;178552199;178552198chr2:179416927;179416926;179416925
N2A2766683221;83222;83223 chr2:178552200;178552199;178552198chr2:179416927;179416926;179416925
N2B2116963730;63731;63732 chr2:178552200;178552199;178552198chr2:179416927;179416926;179416925
Novex-12129464105;64106;64107 chr2:178552200;178552199;178552198chr2:179416927;179416926;179416925
Novex-22136164306;64307;64308 chr2:178552200;178552199;178552198chr2:179416927;179416926;179416925
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: F
  • RefSeq wild type transcript codon: TTT
  • RefSeq wild type template codon: AAA
  • Domain: Fn3-108
  • Domain position: 11
  • Structural Position: 12
  • Q(SASA): 0.2228
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
F/I None None 0.026 N 0.381 0.174 0.162503812791 gnomAD-4.0.0 1.59165E-06 None None None None I None 0 0 None 0 2.77331E-05 None 0 0 0 0 0
F/S None None 0.984 N 0.743 0.528 0.764471569041 gnomAD-4.0.0 1.59168E-06 None None None None I None 0 0 None 0 0 None 0 0 2.85876E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
F/A 0.5713 likely_pathogenic 0.5974 pathogenic -2.357 Highly Destabilizing 0.919 D 0.672 neutral None None None None I
F/C 0.2909 likely_benign 0.3164 benign -1.912 Destabilizing 0.999 D 0.749 deleterious N 0.499397183 None None I
F/D 0.9433 likely_pathogenic 0.9525 pathogenic -1.08 Destabilizing 0.996 D 0.815 deleterious None None None None I
F/E 0.9201 likely_pathogenic 0.9304 pathogenic -0.908 Destabilizing 0.996 D 0.808 deleterious None None None None I
F/G 0.8676 likely_pathogenic 0.8674 pathogenic -2.77 Highly Destabilizing 0.996 D 0.785 deleterious None None None None I
F/H 0.7935 likely_pathogenic 0.7982 pathogenic -1.138 Destabilizing 0.999 D 0.701 prob.neutral None None None None I
F/I 0.1609 likely_benign 0.197 benign -1.069 Destabilizing 0.026 N 0.381 neutral N 0.408985822 None None I
F/K 0.9186 likely_pathogenic 0.9271 pathogenic -1.71 Destabilizing 0.988 D 0.807 deleterious None None None None I
F/L 0.7041 likely_pathogenic 0.7604 pathogenic -1.069 Destabilizing 0.026 N 0.215 neutral N 0.456835697 None None I
F/M 0.3656 ambiguous 0.3925 ambiguous -1.067 Destabilizing 0.976 D 0.569 neutral None None None None I
F/N 0.8394 likely_pathogenic 0.8576 pathogenic -1.928 Destabilizing 0.996 D 0.815 deleterious None None None None I
F/P 0.908 likely_pathogenic 0.9369 pathogenic -1.498 Destabilizing 0.996 D 0.812 deleterious None None None None I
F/Q 0.8742 likely_pathogenic 0.8793 pathogenic -1.833 Destabilizing 0.996 D 0.81 deleterious None None None None I
F/R 0.8817 likely_pathogenic 0.8945 pathogenic -1.256 Destabilizing 0.988 D 0.819 deleterious None None None None I
F/S 0.656 likely_pathogenic 0.6698 pathogenic -2.847 Highly Destabilizing 0.984 D 0.743 deleterious N 0.493742682 None None I
F/T 0.5375 ambiguous 0.5708 pathogenic -2.563 Highly Destabilizing 0.976 D 0.731 prob.delet. None None None None I
F/V 0.1912 likely_benign 0.2212 benign -1.498 Destabilizing 0.64 D 0.61 neutral N 0.393744224 None None I
F/W 0.5047 ambiguous 0.5174 ambiguous -0.089 Destabilizing 0.999 D 0.565 neutral None None None None I
F/Y 0.2617 likely_benign 0.2647 benign -0.444 Destabilizing 0.946 D 0.612 neutral N 0.509536818 None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.