Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30234 | 90925;90926;90927 | chr2:178552200;178552199;178552198 | chr2:179416927;179416926;179416925 |
N2AB | 28593 | 86002;86003;86004 | chr2:178552200;178552199;178552198 | chr2:179416927;179416926;179416925 |
N2A | 27666 | 83221;83222;83223 | chr2:178552200;178552199;178552198 | chr2:179416927;179416926;179416925 |
N2B | 21169 | 63730;63731;63732 | chr2:178552200;178552199;178552198 | chr2:179416927;179416926;179416925 |
Novex-1 | 21294 | 64105;64106;64107 | chr2:178552200;178552199;178552198 | chr2:179416927;179416926;179416925 |
Novex-2 | 21361 | 64306;64307;64308 | chr2:178552200;178552199;178552198 | chr2:179416927;179416926;179416925 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.026 | N | 0.381 | 0.174 | 0.162503812791 | gnomAD-4.0.0 | 1.59165E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
F/S | None | None | 0.984 | N | 0.743 | 0.528 | 0.764471569041 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85876E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.5713 | likely_pathogenic | 0.5974 | pathogenic | -2.357 | Highly Destabilizing | 0.919 | D | 0.672 | neutral | None | None | None | None | I |
F/C | 0.2909 | likely_benign | 0.3164 | benign | -1.912 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.499397183 | None | None | I |
F/D | 0.9433 | likely_pathogenic | 0.9525 | pathogenic | -1.08 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | I |
F/E | 0.9201 | likely_pathogenic | 0.9304 | pathogenic | -0.908 | Destabilizing | 0.996 | D | 0.808 | deleterious | None | None | None | None | I |
F/G | 0.8676 | likely_pathogenic | 0.8674 | pathogenic | -2.77 | Highly Destabilizing | 0.996 | D | 0.785 | deleterious | None | None | None | None | I |
F/H | 0.7935 | likely_pathogenic | 0.7982 | pathogenic | -1.138 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
F/I | 0.1609 | likely_benign | 0.197 | benign | -1.069 | Destabilizing | 0.026 | N | 0.381 | neutral | N | 0.408985822 | None | None | I |
F/K | 0.9186 | likely_pathogenic | 0.9271 | pathogenic | -1.71 | Destabilizing | 0.988 | D | 0.807 | deleterious | None | None | None | None | I |
F/L | 0.7041 | likely_pathogenic | 0.7604 | pathogenic | -1.069 | Destabilizing | 0.026 | N | 0.215 | neutral | N | 0.456835697 | None | None | I |
F/M | 0.3656 | ambiguous | 0.3925 | ambiguous | -1.067 | Destabilizing | 0.976 | D | 0.569 | neutral | None | None | None | None | I |
F/N | 0.8394 | likely_pathogenic | 0.8576 | pathogenic | -1.928 | Destabilizing | 0.996 | D | 0.815 | deleterious | None | None | None | None | I |
F/P | 0.908 | likely_pathogenic | 0.9369 | pathogenic | -1.498 | Destabilizing | 0.996 | D | 0.812 | deleterious | None | None | None | None | I |
F/Q | 0.8742 | likely_pathogenic | 0.8793 | pathogenic | -1.833 | Destabilizing | 0.996 | D | 0.81 | deleterious | None | None | None | None | I |
F/R | 0.8817 | likely_pathogenic | 0.8945 | pathogenic | -1.256 | Destabilizing | 0.988 | D | 0.819 | deleterious | None | None | None | None | I |
F/S | 0.656 | likely_pathogenic | 0.6698 | pathogenic | -2.847 | Highly Destabilizing | 0.984 | D | 0.743 | deleterious | N | 0.493742682 | None | None | I |
F/T | 0.5375 | ambiguous | 0.5708 | pathogenic | -2.563 | Highly Destabilizing | 0.976 | D | 0.731 | prob.delet. | None | None | None | None | I |
F/V | 0.1912 | likely_benign | 0.2212 | benign | -1.498 | Destabilizing | 0.64 | D | 0.61 | neutral | N | 0.393744224 | None | None | I |
F/W | 0.5047 | ambiguous | 0.5174 | ambiguous | -0.089 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | I |
F/Y | 0.2617 | likely_benign | 0.2647 | benign | -0.444 | Destabilizing | 0.946 | D | 0.612 | neutral | N | 0.509536818 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.