Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30241 | 90946;90947;90948 | chr2:178552179;178552178;178552177 | chr2:179416906;179416905;179416904 |
N2AB | 28600 | 86023;86024;86025 | chr2:178552179;178552178;178552177 | chr2:179416906;179416905;179416904 |
N2A | 27673 | 83242;83243;83244 | chr2:178552179;178552178;178552177 | chr2:179416906;179416905;179416904 |
N2B | 21176 | 63751;63752;63753 | chr2:178552179;178552178;178552177 | chr2:179416906;179416905;179416904 |
Novex-1 | 21301 | 64126;64127;64128 | chr2:178552179;178552178;178552177 | chr2:179416906;179416905;179416904 |
Novex-2 | 21368 | 64327;64328;64329 | chr2:178552179;178552178;178552177 | chr2:179416906;179416905;179416904 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.999 | N | 0.613 | 0.326 | 0.249502417897 | gnomAD-4.0.0 | 1.59129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43312E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1388 | likely_benign | 0.1158 | benign | -0.677 | Destabilizing | 0.998 | D | 0.505 | neutral | None | None | None | None | N |
S/C | 0.112 | likely_benign | 0.1095 | benign | -0.791 | Destabilizing | 1.0 | D | 0.806 | deleterious | N | 0.506475929 | None | None | N |
S/D | 0.8873 | likely_pathogenic | 0.8125 | pathogenic | -2.04 | Highly Destabilizing | 0.999 | D | 0.612 | neutral | None | None | None | None | N |
S/E | 0.9099 | likely_pathogenic | 0.8458 | pathogenic | -1.87 | Destabilizing | 0.999 | D | 0.609 | neutral | None | None | None | None | N |
S/F | 0.3804 | ambiguous | 0.3061 | benign | -0.409 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
S/G | 0.1712 | likely_benign | 0.1319 | benign | -1.03 | Destabilizing | 0.999 | D | 0.555 | neutral | N | 0.498295947 | None | None | N |
S/H | 0.5744 | likely_pathogenic | 0.5154 | ambiguous | -1.485 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | N |
S/I | 0.5933 | likely_pathogenic | 0.4606 | ambiguous | 0.203 | Stabilizing | 1.0 | D | 0.811 | deleterious | D | 0.527947545 | None | None | N |
S/K | 0.9734 | likely_pathogenic | 0.9469 | pathogenic | -0.746 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
S/L | 0.3097 | likely_benign | 0.2303 | benign | 0.203 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
S/M | 0.3224 | likely_benign | 0.275 | benign | 0.071 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
S/N | 0.305 | likely_benign | 0.2472 | benign | -1.433 | Destabilizing | 0.999 | D | 0.613 | neutral | N | 0.480596539 | None | None | N |
S/P | 0.9953 | likely_pathogenic | 0.9894 | pathogenic | -0.057 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
S/Q | 0.8169 | likely_pathogenic | 0.7612 | pathogenic | -1.176 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
S/R | 0.9443 | likely_pathogenic | 0.9017 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.498700794 | None | None | N |
S/T | 0.151 | likely_benign | 0.1211 | benign | -0.992 | Destabilizing | 0.999 | D | 0.543 | neutral | D | 0.523103549 | None | None | N |
S/V | 0.5057 | ambiguous | 0.4097 | ambiguous | -0.057 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
S/W | 0.6126 | likely_pathogenic | 0.5493 | ambiguous | -0.828 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
S/Y | 0.3569 | ambiguous | 0.2869 | benign | -0.379 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.