Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30242 | 90949;90950;90951 | chr2:178552176;178552175;178552174 | chr2:179416903;179416902;179416901 |
N2AB | 28601 | 86026;86027;86028 | chr2:178552176;178552175;178552174 | chr2:179416903;179416902;179416901 |
N2A | 27674 | 83245;83246;83247 | chr2:178552176;178552175;178552174 | chr2:179416903;179416902;179416901 |
N2B | 21177 | 63754;63755;63756 | chr2:178552176;178552175;178552174 | chr2:179416903;179416902;179416901 |
Novex-1 | 21302 | 64129;64130;64131 | chr2:178552176;178552175;178552174 | chr2:179416903;179416902;179416901 |
Novex-2 | 21369 | 64330;64331;64332 | chr2:178552176;178552175;178552174 | chr2:179416903;179416902;179416901 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs756607075 | -1.664 | 0.171 | N | 0.829 | 0.337 | 0.753651663445 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
V/F | rs756607075 | -1.664 | 0.171 | N | 0.829 | 0.337 | 0.753651663445 | gnomAD-4.0.0 | 4.77389E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57486E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2113 | likely_benign | 0.2149 | benign | -2.049 | Highly Destabilizing | None | N | 0.261 | neutral | N | 0.515307998 | None | None | N |
V/C | 0.6776 | likely_pathogenic | 0.6865 | pathogenic | -1.565 | Destabilizing | 0.356 | N | 0.801 | deleterious | None | None | None | None | N |
V/D | 0.9878 | likely_pathogenic | 0.9823 | pathogenic | -3.107 | Highly Destabilizing | 0.171 | N | 0.816 | deleterious | D | 0.543615356 | None | None | N |
V/E | 0.9754 | likely_pathogenic | 0.9666 | pathogenic | -2.774 | Highly Destabilizing | 0.072 | N | 0.78 | deleterious | None | None | None | None | N |
V/F | 0.5788 | likely_pathogenic | 0.5015 | ambiguous | -1.184 | Destabilizing | 0.171 | N | 0.829 | deleterious | N | 0.501580268 | None | None | N |
V/G | 0.596 | likely_pathogenic | 0.5763 | pathogenic | -2.682 | Highly Destabilizing | 0.029 | N | 0.762 | deleterious | D | 0.542601398 | None | None | N |
V/H | 0.9905 | likely_pathogenic | 0.9858 | pathogenic | -2.714 | Highly Destabilizing | 0.864 | D | 0.797 | deleterious | None | None | None | None | N |
V/I | 0.0844 | likely_benign | 0.0799 | benign | -0.215 | Destabilizing | None | N | 0.205 | neutral | N | 0.462108231 | None | None | N |
V/K | 0.9873 | likely_pathogenic | 0.981 | pathogenic | -1.752 | Destabilizing | 0.072 | N | 0.781 | deleterious | None | None | None | None | N |
V/L | 0.2226 | likely_benign | 0.2015 | benign | -0.215 | Destabilizing | 0.002 | N | 0.478 | neutral | N | 0.496369946 | None | None | N |
V/M | 0.2253 | likely_benign | 0.1911 | benign | -0.467 | Destabilizing | 0.007 | N | 0.472 | neutral | None | None | None | None | N |
V/N | 0.9476 | likely_pathogenic | 0.931 | pathogenic | -2.489 | Highly Destabilizing | 0.356 | N | 0.825 | deleterious | None | None | None | None | N |
V/P | 0.9893 | likely_pathogenic | 0.9849 | pathogenic | -0.806 | Destabilizing | 0.214 | N | 0.817 | deleterious | None | None | None | None | N |
V/Q | 0.9666 | likely_pathogenic | 0.953 | pathogenic | -2.087 | Highly Destabilizing | 0.356 | N | 0.82 | deleterious | None | None | None | None | N |
V/R | 0.9754 | likely_pathogenic | 0.9648 | pathogenic | -1.964 | Destabilizing | 0.214 | N | 0.823 | deleterious | None | None | None | None | N |
V/S | 0.6467 | likely_pathogenic | 0.6325 | pathogenic | -3.0 | Highly Destabilizing | 0.038 | N | 0.74 | deleterious | None | None | None | None | N |
V/T | 0.5061 | ambiguous | 0.4857 | ambiguous | -2.491 | Highly Destabilizing | 0.038 | N | 0.629 | neutral | None | None | None | None | N |
V/W | 0.9925 | likely_pathogenic | 0.9889 | pathogenic | -1.786 | Destabilizing | 0.864 | D | 0.779 | deleterious | None | None | None | None | N |
V/Y | 0.954 | likely_pathogenic | 0.9355 | pathogenic | -1.381 | Destabilizing | 0.356 | N | 0.833 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.