Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30245 | 90958;90959;90960 | chr2:178552167;178552166;178552165 | chr2:179416894;179416893;179416892 |
N2AB | 28604 | 86035;86036;86037 | chr2:178552167;178552166;178552165 | chr2:179416894;179416893;179416892 |
N2A | 27677 | 83254;83255;83256 | chr2:178552167;178552166;178552165 | chr2:179416894;179416893;179416892 |
N2B | 21180 | 63763;63764;63765 | chr2:178552167;178552166;178552165 | chr2:179416894;179416893;179416892 |
Novex-1 | 21305 | 64138;64139;64140 | chr2:178552167;178552166;178552165 | chr2:179416894;179416893;179416892 |
Novex-2 | 21372 | 64339;64340;64341 | chr2:178552167;178552166;178552165 | chr2:179416894;179416893;179416892 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | rs1407888645 | None | 1.0 | N | 0.786 | 0.456 | 0.814184237618 | gnomAD-4.0.0 | 1.59125E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85817E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.172 | likely_benign | 0.1711 | benign | -0.878 | Destabilizing | 0.997 | D | 0.52 | neutral | N | 0.487581071 | None | None | N |
S/C | 0.1852 | likely_benign | 0.1803 | benign | -0.674 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
S/D | 0.8715 | likely_pathogenic | 0.849 | pathogenic | -1.023 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
S/E | 0.843 | likely_pathogenic | 0.822 | pathogenic | -0.891 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
S/F | 0.4973 | ambiguous | 0.4436 | ambiguous | -0.794 | Destabilizing | 1.0 | D | 0.904 | deleterious | None | None | None | None | N |
S/G | 0.2096 | likely_benign | 0.2155 | benign | -1.234 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
S/H | 0.5273 | ambiguous | 0.4979 | ambiguous | -1.562 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
S/I | 0.5503 | ambiguous | 0.4828 | ambiguous | 0.003 | Stabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/K | 0.8894 | likely_pathogenic | 0.8795 | pathogenic | -0.394 | Destabilizing | 0.999 | D | 0.686 | prob.neutral | None | None | None | None | N |
S/L | 0.2813 | likely_benign | 0.2484 | benign | 0.003 | Stabilizing | 1.0 | D | 0.786 | deleterious | N | 0.504711048 | None | None | N |
S/M | 0.406 | ambiguous | 0.3691 | ambiguous | 0.05 | Stabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
S/N | 0.4761 | ambiguous | 0.4341 | ambiguous | -0.852 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
S/P | 0.9875 | likely_pathogenic | 0.9862 | pathogenic | -0.256 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.546959945 | None | None | N |
S/Q | 0.7038 | likely_pathogenic | 0.6791 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
S/R | 0.8402 | likely_pathogenic | 0.8173 | pathogenic | -0.571 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
S/T | 0.1277 | likely_benign | 0.1277 | benign | -0.667 | Destabilizing | 0.999 | D | 0.548 | neutral | N | 0.509344817 | None | None | N |
S/V | 0.4934 | ambiguous | 0.449 | ambiguous | -0.256 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
S/W | 0.6631 | likely_pathogenic | 0.6003 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
S/Y | 0.4652 | ambiguous | 0.4127 | ambiguous | -0.529 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.