Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30256 | 90991;90992;90993 | chr2:178552134;178552133;178552132 | chr2:179416861;179416860;179416859 |
N2AB | 28615 | 86068;86069;86070 | chr2:178552134;178552133;178552132 | chr2:179416861;179416860;179416859 |
N2A | 27688 | 83287;83288;83289 | chr2:178552134;178552133;178552132 | chr2:179416861;179416860;179416859 |
N2B | 21191 | 63796;63797;63798 | chr2:178552134;178552133;178552132 | chr2:179416861;179416860;179416859 |
Novex-1 | 21316 | 64171;64172;64173 | chr2:178552134;178552133;178552132 | chr2:179416861;179416860;179416859 |
Novex-2 | 21383 | 64372;64373;64374 | chr2:178552134;178552133;178552132 | chr2:179416861;179416860;179416859 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | None | None | 0.999 | N | 0.623 | 0.533 | 0.345405024496 | gnomAD-4.0.0 | 6.84213E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99452E-07 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.599 | 0.389 | 0.296329037015 | gnomAD-4.0.0 | 1.20056E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31268E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2967 | likely_benign | 0.2743 | benign | -0.11 | Destabilizing | 0.999 | D | 0.623 | neutral | N | 0.471594506 | None | None | N |
E/C | 0.9073 | likely_pathogenic | 0.9015 | pathogenic | -0.08 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
E/D | 0.0815 | likely_benign | 0.081 | benign | -0.196 | Destabilizing | 0.999 | D | 0.429 | neutral | N | 0.471074431 | None | None | N |
E/F | 0.8733 | likely_pathogenic | 0.8659 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.593 | neutral | None | None | None | None | N |
E/G | 0.3634 | ambiguous | 0.3417 | ambiguous | -0.262 | Destabilizing | 1.0 | D | 0.626 | neutral | N | 0.469726624 | None | None | N |
E/H | 0.6715 | likely_pathogenic | 0.6507 | pathogenic | 0.434 | Stabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
E/I | 0.4872 | ambiguous | 0.4972 | ambiguous | 0.24 | Stabilizing | 1.0 | D | 0.623 | neutral | None | None | None | None | N |
E/K | 0.3356 | likely_benign | 0.334 | benign | 0.472 | Stabilizing | 0.999 | D | 0.599 | neutral | N | 0.487505321 | None | None | N |
E/L | 0.5828 | likely_pathogenic | 0.589 | pathogenic | 0.24 | Stabilizing | 1.0 | D | 0.633 | neutral | None | None | None | None | N |
E/M | 0.6333 | likely_pathogenic | 0.6331 | pathogenic | 0.116 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
E/N | 0.2863 | likely_benign | 0.2724 | benign | 0.179 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
E/P | 0.5574 | ambiguous | 0.5382 | ambiguous | 0.143 | Stabilizing | 1.0 | D | 0.65 | neutral | None | None | None | None | N |
E/Q | 0.2683 | likely_benign | 0.2598 | benign | 0.211 | Stabilizing | 1.0 | D | 0.616 | neutral | N | 0.441869032 | None | None | N |
E/R | 0.5112 | ambiguous | 0.499 | ambiguous | 0.703 | Stabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/S | 0.3243 | likely_benign | 0.3006 | benign | 0.026 | Stabilizing | 0.999 | D | 0.654 | neutral | None | None | None | None | N |
E/T | 0.3794 | ambiguous | 0.36 | ambiguous | 0.158 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/V | 0.3311 | likely_benign | 0.3355 | benign | 0.143 | Stabilizing | 1.0 | D | 0.664 | neutral | N | 0.480322461 | None | None | N |
E/W | 0.956 | likely_pathogenic | 0.953 | pathogenic | 0.043 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | N |
E/Y | 0.763 | likely_pathogenic | 0.7508 | pathogenic | 0.186 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.