Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30257 | 90994;90995;90996 | chr2:178552131;178552130;178552129 | chr2:179416858;179416857;179416856 |
N2AB | 28616 | 86071;86072;86073 | chr2:178552131;178552130;178552129 | chr2:179416858;179416857;179416856 |
N2A | 27689 | 83290;83291;83292 | chr2:178552131;178552130;178552129 | chr2:179416858;179416857;179416856 |
N2B | 21192 | 63799;63800;63801 | chr2:178552131;178552130;178552129 | chr2:179416858;179416857;179416856 |
Novex-1 | 21317 | 64174;64175;64176 | chr2:178552131;178552130;178552129 | chr2:179416858;179416857;179416856 |
Novex-2 | 21384 | 64375;64376;64377 | chr2:178552131;178552130;178552129 | chr2:179416858;179416857;179416856 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.993 | N | 0.385 | 0.274 | 0.620317764101 | gnomAD-4.0.0 | 1.59132E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85822E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9745 | likely_pathogenic | 0.9727 | pathogenic | -2.261 | Highly Destabilizing | 0.999 | D | 0.668 | neutral | None | None | None | None | N |
I/C | 0.9785 | likely_pathogenic | 0.9769 | pathogenic | -1.285 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
I/D | 0.9953 | likely_pathogenic | 0.9949 | pathogenic | -2.096 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
I/E | 0.9893 | likely_pathogenic | 0.9877 | pathogenic | -2.061 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
I/F | 0.8631 | likely_pathogenic | 0.8624 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.536880633 | None | None | N |
I/G | 0.9944 | likely_pathogenic | 0.9935 | pathogenic | -2.641 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
I/H | 0.9937 | likely_pathogenic | 0.9928 | pathogenic | -1.909 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
I/K | 0.9824 | likely_pathogenic | 0.9787 | pathogenic | -1.659 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
I/L | 0.3864 | ambiguous | 0.4238 | ambiguous | -1.246 | Destabilizing | 0.993 | D | 0.405 | neutral | N | 0.485023403 | None | None | N |
I/M | 0.4137 | ambiguous | 0.4188 | ambiguous | -0.799 | Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.545998894 | None | None | N |
I/N | 0.9285 | likely_pathogenic | 0.9123 | pathogenic | -1.482 | Destabilizing | 1.0 | D | 0.875 | deleterious | D | 0.558369157 | None | None | N |
I/P | 0.9598 | likely_pathogenic | 0.9523 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
I/Q | 0.988 | likely_pathogenic | 0.9862 | pathogenic | -1.655 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
I/R | 0.9828 | likely_pathogenic | 0.9795 | pathogenic | -1.0 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/S | 0.9779 | likely_pathogenic | 0.9749 | pathogenic | -2.086 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.546252383 | None | None | N |
I/T | 0.9444 | likely_pathogenic | 0.9396 | pathogenic | -1.934 | Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.534896078 | None | None | N |
I/V | 0.1458 | likely_benign | 0.1663 | benign | -1.557 | Destabilizing | 0.993 | D | 0.385 | neutral | N | 0.488316184 | None | None | N |
I/W | 0.9943 | likely_pathogenic | 0.9945 | pathogenic | -1.825 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
I/Y | 0.975 | likely_pathogenic | 0.9711 | pathogenic | -1.638 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.