Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30259 | 91000;91001;91002 | chr2:178552125;178552124;178552123 | chr2:179416852;179416851;179416850 |
N2AB | 28618 | 86077;86078;86079 | chr2:178552125;178552124;178552123 | chr2:179416852;179416851;179416850 |
N2A | 27691 | 83296;83297;83298 | chr2:178552125;178552124;178552123 | chr2:179416852;179416851;179416850 |
N2B | 21194 | 63805;63806;63807 | chr2:178552125;178552124;178552123 | chr2:179416852;179416851;179416850 |
Novex-1 | 21319 | 64180;64181;64182 | chr2:178552125;178552124;178552123 | chr2:179416852;179416851;179416850 |
Novex-2 | 21386 | 64381;64382;64383 | chr2:178552125;178552124;178552123 | chr2:179416852;179416851;179416850 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/W | rs1699680559 | None | 0.99 | N | 0.646 | 0.358 | 0.403896168776 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 1.90042E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.4045 | ambiguous | 0.4767 | ambiguous | -1.075 | Destabilizing | 0.25 | N | 0.457 | neutral | None | None | None | None | N |
C/D | 0.9109 | likely_pathogenic | 0.9094 | pathogenic | -0.257 | Destabilizing | 0.85 | D | 0.683 | prob.neutral | None | None | None | None | N |
C/E | 0.9612 | likely_pathogenic | 0.9634 | pathogenic | -0.187 | Destabilizing | 0.85 | D | 0.689 | prob.neutral | None | None | None | None | N |
C/F | 0.6317 | likely_pathogenic | 0.5691 | pathogenic | -0.956 | Destabilizing | 0.896 | D | 0.657 | neutral | N | 0.46674326 | None | None | N |
C/G | 0.1095 | likely_benign | 0.1667 | benign | -1.318 | Destabilizing | 0.002 | N | 0.429 | neutral | N | 0.342331182 | None | None | N |
C/H | 0.7623 | likely_pathogenic | 0.7061 | pathogenic | -1.736 | Destabilizing | 0.977 | D | 0.687 | prob.neutral | None | None | None | None | N |
C/I | 0.9217 | likely_pathogenic | 0.9163 | pathogenic | -0.49 | Destabilizing | 0.92 | D | 0.625 | neutral | None | None | None | None | N |
C/K | 0.9662 | likely_pathogenic | 0.9606 | pathogenic | -0.22 | Destabilizing | 0.739 | D | 0.689 | prob.neutral | None | None | None | None | N |
C/L | 0.7835 | likely_pathogenic | 0.7909 | pathogenic | -0.49 | Destabilizing | 0.617 | D | 0.558 | neutral | None | None | None | None | N |
C/M | 0.8496 | likely_pathogenic | 0.8485 | pathogenic | -0.177 | Destabilizing | 0.992 | D | 0.591 | neutral | None | None | None | None | N |
C/N | 0.5036 | ambiguous | 0.4869 | ambiguous | -0.207 | Destabilizing | 0.739 | D | 0.689 | prob.neutral | None | None | None | None | N |
C/P | 0.9978 | likely_pathogenic | 0.9972 | pathogenic | -0.659 | Destabilizing | 0.92 | D | 0.71 | prob.delet. | None | None | None | None | N |
C/Q | 0.8565 | likely_pathogenic | 0.8572 | pathogenic | -0.224 | Destabilizing | 0.85 | D | 0.719 | prob.delet. | None | None | None | None | N |
C/R | 0.8243 | likely_pathogenic | 0.8025 | pathogenic | -0.298 | Destabilizing | 0.81 | D | 0.713 | prob.delet. | N | 0.424240489 | None | None | N |
C/S | 0.2261 | likely_benign | 0.2699 | benign | -0.597 | Destabilizing | 0.016 | N | 0.434 | neutral | N | 0.381700433 | None | None | N |
C/T | 0.6437 | likely_pathogenic | 0.662 | pathogenic | -0.363 | Destabilizing | 0.447 | N | 0.568 | neutral | None | None | None | None | N |
C/V | 0.82 | likely_pathogenic | 0.8054 | pathogenic | -0.659 | Destabilizing | 0.617 | D | 0.605 | neutral | None | None | None | None | N |
C/W | 0.8889 | likely_pathogenic | 0.8773 | pathogenic | -1.049 | Destabilizing | 0.99 | D | 0.646 | neutral | N | 0.510283393 | None | None | N |
C/Y | 0.6563 | likely_pathogenic | 0.6305 | pathogenic | -0.842 | Destabilizing | 0.963 | D | 0.659 | neutral | N | 0.430398457 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.