Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30289 | 91090;91091;91092 | chr2:178552035;178552034;178552033 | chr2:179416762;179416761;179416760 |
N2AB | 28648 | 86167;86168;86169 | chr2:178552035;178552034;178552033 | chr2:179416762;179416761;179416760 |
N2A | 27721 | 83386;83387;83388 | chr2:178552035;178552034;178552033 | chr2:179416762;179416761;179416760 |
N2B | 21224 | 63895;63896;63897 | chr2:178552035;178552034;178552033 | chr2:179416762;179416761;179416760 |
Novex-1 | 21349 | 64270;64271;64272 | chr2:178552035;178552034;178552033 | chr2:179416762;179416761;179416760 |
Novex-2 | 21416 | 64471;64472;64473 | chr2:178552035;178552034;178552033 | chr2:179416762;179416761;179416760 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs1338109334 | -1.945 | 1.0 | D | 0.827 | 0.884 | 0.934516764146 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
L/P | rs1338109334 | -1.945 | 1.0 | D | 0.827 | 0.884 | 0.934516764146 | gnomAD-4.0.0 | 1.59187E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85917E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9758 | likely_pathogenic | 0.9688 | pathogenic | -2.781 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
L/C | 0.9624 | likely_pathogenic | 0.9588 | pathogenic | -2.478 | Highly Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9996 | pathogenic | -3.298 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
L/E | 0.9987 | likely_pathogenic | 0.9983 | pathogenic | -3.115 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/F | 0.9286 | likely_pathogenic | 0.8838 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
L/G | 0.9967 | likely_pathogenic | 0.9955 | pathogenic | -3.303 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
L/H | 0.9962 | likely_pathogenic | 0.9943 | pathogenic | -2.662 | Highly Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
L/I | 0.4827 | ambiguous | 0.427 | ambiguous | -1.282 | Destabilizing | 0.999 | D | 0.831 | deleterious | D | 0.643768896 | None | None | N |
L/K | 0.9967 | likely_pathogenic | 0.9957 | pathogenic | -2.22 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/M | 0.5868 | likely_pathogenic | 0.5227 | ambiguous | -1.321 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
L/N | 0.9979 | likely_pathogenic | 0.9968 | pathogenic | -2.539 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
L/P | 0.9968 | likely_pathogenic | 0.9953 | pathogenic | -1.762 | Destabilizing | 1.0 | D | 0.827 | deleterious | D | 0.682963643 | None | None | N |
L/Q | 0.995 | likely_pathogenic | 0.993 | pathogenic | -2.493 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | D | 0.682963643 | None | None | N |
L/R | 0.9908 | likely_pathogenic | 0.9889 | pathogenic | -1.772 | Destabilizing | 1.0 | D | 0.805 | deleterious | D | 0.666944282 | None | None | N |
L/S | 0.9977 | likely_pathogenic | 0.9965 | pathogenic | -3.238 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/T | 0.974 | likely_pathogenic | 0.965 | pathogenic | -2.909 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/V | 0.5346 | ambiguous | 0.5047 | ambiguous | -1.762 | Destabilizing | 0.999 | D | 0.837 | deleterious | D | 0.617645013 | None | None | N |
L/W | 0.9952 | likely_pathogenic | 0.9923 | pathogenic | -2.185 | Highly Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/Y | 0.9946 | likely_pathogenic | 0.9919 | pathogenic | -1.951 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.