Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30290 | 91093;91094;91095 | chr2:178552032;178552031;178552030 | chr2:179416759;179416758;179416757 |
N2AB | 28649 | 86170;86171;86172 | chr2:178552032;178552031;178552030 | chr2:179416759;179416758;179416757 |
N2A | 27722 | 83389;83390;83391 | chr2:178552032;178552031;178552030 | chr2:179416759;179416758;179416757 |
N2B | 21225 | 63898;63899;63900 | chr2:178552032;178552031;178552030 | chr2:179416759;179416758;179416757 |
Novex-1 | 21350 | 64273;64274;64275 | chr2:178552032;178552031;178552030 | chr2:179416759;179416758;179416757 |
Novex-2 | 21417 | 64474;64475;64476 | chr2:178552032;178552031;178552030 | chr2:179416759;179416758;179416757 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.967 | N | 0.602 | 0.5 | 0.827830861967 | gnomAD-4.0.0 | 1.59208E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85977E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2706 | likely_benign | 0.2159 | benign | -0.998 | Destabilizing | 0.892 | D | 0.385 | neutral | N | 0.497084809 | None | None | N |
V/C | 0.7286 | likely_pathogenic | 0.6706 | pathogenic | -0.639 | Destabilizing | 0.999 | D | 0.585 | neutral | None | None | None | None | N |
V/D | 0.6102 | likely_pathogenic | 0.4837 | ambiguous | -0.65 | Destabilizing | 0.935 | D | 0.719 | prob.delet. | N | 0.50820588 | None | None | N |
V/E | 0.4306 | ambiguous | 0.3294 | benign | -0.698 | Destabilizing | 0.975 | D | 0.615 | neutral | None | None | None | None | N |
V/F | 0.2569 | likely_benign | 0.2004 | benign | -0.895 | Destabilizing | 0.967 | D | 0.585 | neutral | N | 0.50924603 | None | None | N |
V/G | 0.3006 | likely_benign | 0.2564 | benign | -1.238 | Destabilizing | 0.967 | D | 0.602 | neutral | N | 0.493916811 | None | None | N |
V/H | 0.605 | likely_pathogenic | 0.4979 | ambiguous | -0.677 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/I | 0.0814 | likely_benign | 0.0744 | benign | -0.472 | Destabilizing | 0.025 | N | 0.269 | neutral | N | 0.408351104 | None | None | N |
V/K | 0.4608 | ambiguous | 0.3338 | benign | -0.77 | Destabilizing | 0.975 | D | 0.641 | neutral | None | None | None | None | N |
V/L | 0.1715 | likely_benign | 0.1392 | benign | -0.472 | Destabilizing | 0.369 | N | 0.437 | neutral | N | 0.472495796 | None | None | N |
V/M | 0.1629 | likely_benign | 0.1361 | benign | -0.409 | Destabilizing | 0.975 | D | 0.519 | neutral | None | None | None | None | N |
V/N | 0.3283 | likely_benign | 0.2551 | benign | -0.512 | Destabilizing | 0.253 | N | 0.409 | neutral | None | None | None | None | N |
V/P | 0.8429 | likely_pathogenic | 0.7659 | pathogenic | -0.612 | Destabilizing | 0.996 | D | 0.661 | neutral | None | None | None | None | N |
V/Q | 0.3179 | likely_benign | 0.2485 | benign | -0.708 | Destabilizing | 0.987 | D | 0.668 | neutral | None | None | None | None | N |
V/R | 0.4322 | ambiguous | 0.3102 | benign | -0.228 | Destabilizing | 0.987 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/S | 0.2807 | likely_benign | 0.2287 | benign | -0.965 | Destabilizing | 0.975 | D | 0.537 | neutral | None | None | None | None | N |
V/T | 0.2317 | likely_benign | 0.1817 | benign | -0.903 | Destabilizing | 0.916 | D | 0.443 | neutral | None | None | None | None | N |
V/W | 0.8693 | likely_pathogenic | 0.8146 | pathogenic | -1.019 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/Y | 0.6319 | likely_pathogenic | 0.5418 | ambiguous | -0.725 | Destabilizing | 0.987 | D | 0.588 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.