Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30291 | 91096;91097;91098 | chr2:178552029;178552028;178552027 | chr2:179416756;179416755;179416754 |
N2AB | 28650 | 86173;86174;86175 | chr2:178552029;178552028;178552027 | chr2:179416756;179416755;179416754 |
N2A | 27723 | 83392;83393;83394 | chr2:178552029;178552028;178552027 | chr2:179416756;179416755;179416754 |
N2B | 21226 | 63901;63902;63903 | chr2:178552029;178552028;178552027 | chr2:179416756;179416755;179416754 |
Novex-1 | 21351 | 64276;64277;64278 | chr2:178552029;178552028;178552027 | chr2:179416756;179416755;179416754 |
Novex-2 | 21418 | 64477;64478;64479 | chr2:178552029;178552028;178552027 | chr2:179416756;179416755;179416754 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1575514675 | None | 0.999 | N | 0.687 | 0.347 | 0.292787519742 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 4.77236E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6661 | likely_pathogenic | 0.5485 | ambiguous | -0.191 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
K/C | 0.8842 | likely_pathogenic | 0.8404 | pathogenic | -0.233 | Destabilizing | 1.0 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/D | 0.8868 | likely_pathogenic | 0.8278 | pathogenic | 0.042 | Stabilizing | 1.0 | D | 0.639 | neutral | None | None | None | None | N |
K/E | 0.41 | ambiguous | 0.3054 | benign | 0.086 | Stabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.406348162 | None | None | N |
K/F | 0.9646 | likely_pathogenic | 0.9455 | pathogenic | -0.168 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
K/G | 0.7936 | likely_pathogenic | 0.6939 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
K/H | 0.6236 | likely_pathogenic | 0.5648 | pathogenic | -0.824 | Destabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
K/I | 0.7644 | likely_pathogenic | 0.6691 | pathogenic | 0.489 | Stabilizing | 1.0 | D | 0.661 | neutral | N | 0.466879332 | None | None | N |
K/L | 0.7252 | likely_pathogenic | 0.6347 | pathogenic | 0.489 | Stabilizing | 1.0 | D | 0.617 | neutral | None | None | None | None | N |
K/M | 0.5527 | ambiguous | 0.4514 | ambiguous | 0.327 | Stabilizing | 1.0 | D | 0.603 | neutral | None | None | None | None | N |
K/N | 0.8087 | likely_pathogenic | 0.715 | pathogenic | 0.007 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.460433363 | None | None | N |
K/P | 0.7404 | likely_pathogenic | 0.6324 | pathogenic | 0.292 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
K/Q | 0.2612 | likely_benign | 0.2142 | benign | -0.136 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.438884655 | None | None | N |
K/R | 0.1003 | likely_benign | 0.0956 | benign | -0.292 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.449563008 | None | None | N |
K/S | 0.7875 | likely_pathogenic | 0.6852 | pathogenic | -0.541 | Destabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
K/T | 0.4609 | ambiguous | 0.3577 | ambiguous | -0.322 | Destabilizing | 1.0 | D | 0.632 | neutral | N | 0.377932196 | None | None | N |
K/V | 0.699 | likely_pathogenic | 0.6108 | pathogenic | 0.292 | Stabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
K/W | 0.9382 | likely_pathogenic | 0.9145 | pathogenic | -0.117 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/Y | 0.9114 | likely_pathogenic | 0.8734 | pathogenic | 0.198 | Stabilizing | 1.0 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.