Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30292 | 91099;91100;91101 | chr2:178552026;178552025;178552024 | chr2:179416753;179416752;179416751 |
N2AB | 28651 | 86176;86177;86178 | chr2:178552026;178552025;178552024 | chr2:179416753;179416752;179416751 |
N2A | 27724 | 83395;83396;83397 | chr2:178552026;178552025;178552024 | chr2:179416753;179416752;179416751 |
N2B | 21227 | 63904;63905;63906 | chr2:178552026;178552025;178552024 | chr2:179416753;179416752;179416751 |
Novex-1 | 21352 | 64279;64280;64281 | chr2:178552026;178552025;178552024 | chr2:179416753;179416752;179416751 |
Novex-2 | 21419 | 64480;64481;64482 | chr2:178552026;178552025;178552024 | chr2:179416753;179416752;179416751 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.896 | N | 0.576 | 0.261 | 0.210429274316 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43394E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.3359 | likely_benign | 0.2618 | benign | -0.219 | Destabilizing | 0.811 | D | 0.651 | neutral | N | 0.466705974 | None | None | I |
D/C | 0.7473 | likely_pathogenic | 0.6819 | pathogenic | -0.051 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
D/E | 0.1928 | likely_benign | 0.1798 | benign | -0.304 | Destabilizing | 0.946 | D | 0.479 | neutral | N | 0.484483658 | None | None | I |
D/F | 0.6895 | likely_pathogenic | 0.6347 | pathogenic | -0.18 | Destabilizing | 0.996 | D | 0.715 | prob.delet. | None | None | None | None | I |
D/G | 0.1266 | likely_benign | 0.0997 | benign | -0.41 | Destabilizing | 0.004 | N | 0.376 | neutral | N | 0.310277478 | None | None | I |
D/H | 0.4179 | ambiguous | 0.3605 | ambiguous | 0.042 | Stabilizing | 0.999 | D | 0.591 | neutral | N | 0.477037611 | None | None | I |
D/I | 0.7176 | likely_pathogenic | 0.6337 | pathogenic | 0.233 | Stabilizing | 0.996 | D | 0.711 | prob.delet. | None | None | None | None | I |
D/K | 0.6522 | likely_pathogenic | 0.5665 | pathogenic | 0.211 | Stabilizing | 0.988 | D | 0.584 | neutral | None | None | None | None | I |
D/L | 0.6034 | likely_pathogenic | 0.5362 | ambiguous | 0.233 | Stabilizing | 0.988 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/M | 0.7581 | likely_pathogenic | 0.703 | pathogenic | 0.268 | Stabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | I |
D/N | 0.1168 | likely_benign | 0.1043 | benign | -0.01 | Destabilizing | 0.896 | D | 0.576 | neutral | N | 0.43547899 | None | None | I |
D/P | 0.9486 | likely_pathogenic | 0.9224 | pathogenic | 0.104 | Stabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | I |
D/Q | 0.5282 | ambiguous | 0.4752 | ambiguous | 0.012 | Stabilizing | 0.996 | D | 0.527 | neutral | None | None | None | None | I |
D/R | 0.6869 | likely_pathogenic | 0.6039 | pathogenic | 0.43 | Stabilizing | 0.988 | D | 0.693 | prob.neutral | None | None | None | None | I |
D/S | 0.2094 | likely_benign | 0.1677 | benign | -0.143 | Destabilizing | 0.919 | D | 0.537 | neutral | None | None | None | None | I |
D/T | 0.4388 | ambiguous | 0.3707 | ambiguous | -0.001 | Destabilizing | 0.988 | D | 0.581 | neutral | None | None | None | None | I |
D/V | 0.5025 | ambiguous | 0.4227 | ambiguous | 0.104 | Stabilizing | 0.984 | D | 0.693 | prob.neutral | N | 0.473383474 | None | None | I |
D/W | 0.9056 | likely_pathogenic | 0.8761 | pathogenic | -0.075 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | I |
D/Y | 0.2676 | likely_benign | 0.2294 | benign | 0.047 | Stabilizing | 0.995 | D | 0.717 | prob.delet. | N | 0.475768175 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.