Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30299 | 91120;91121;91122 | chr2:178552005;178552004;178552003 | chr2:179416732;179416731;179416730 |
N2AB | 28658 | 86197;86198;86199 | chr2:178552005;178552004;178552003 | chr2:179416732;179416731;179416730 |
N2A | 27731 | 83416;83417;83418 | chr2:178552005;178552004;178552003 | chr2:179416732;179416731;179416730 |
N2B | 21234 | 63925;63926;63927 | chr2:178552005;178552004;178552003 | chr2:179416732;179416731;179416730 |
Novex-1 | 21359 | 64300;64301;64302 | chr2:178552005;178552004;178552003 | chr2:179416732;179416731;179416730 |
Novex-2 | 21426 | 64501;64502;64503 | chr2:178552005;178552004;178552003 | chr2:179416732;179416731;179416730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs774161568 | -0.737 | 0.76 | N | 0.526 | 0.537 | 0.540288329166 | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.05212E-04 | None | 0 | None | 0 | 0 | 0 |
V/L | rs774161568 | -0.737 | 0.76 | N | 0.526 | 0.537 | 0.540288329166 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 3.861E-04 | None | 0 | 0 | 0 | 0 | 0 |
V/L | rs774161568 | -0.737 | 0.76 | N | 0.526 | 0.537 | 0.540288329166 | gnomAD-4.0.0 | 6.4142E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.21324E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9098 | likely_pathogenic | 0.9013 | pathogenic | -2.644 | Highly Destabilizing | 0.939 | D | 0.619 | neutral | D | 0.572394122 | None | None | N |
V/C | 0.9696 | likely_pathogenic | 0.9706 | pathogenic | -2.079 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
V/D | 0.9988 | likely_pathogenic | 0.9986 | pathogenic | -3.651 | Highly Destabilizing | 0.998 | D | 0.905 | deleterious | None | None | None | None | N |
V/E | 0.9954 | likely_pathogenic | 0.9945 | pathogenic | -3.339 | Highly Destabilizing | 0.997 | D | 0.889 | deleterious | D | 0.636216441 | None | None | N |
V/F | 0.9226 | likely_pathogenic | 0.9173 | pathogenic | -1.543 | Destabilizing | 0.986 | D | 0.824 | deleterious | None | None | None | None | N |
V/G | 0.952 | likely_pathogenic | 0.9461 | pathogenic | -3.217 | Highly Destabilizing | 0.997 | D | 0.907 | deleterious | D | 0.636216441 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -3.046 | Highly Destabilizing | 0.999 | D | 0.887 | deleterious | None | None | None | None | N |
V/I | 0.0874 | likely_benign | 0.0944 | benign | -0.958 | Destabilizing | 0.06 | N | 0.297 | neutral | None | None | None | None | N |
V/K | 0.9968 | likely_pathogenic | 0.9964 | pathogenic | -2.299 | Highly Destabilizing | 0.993 | D | 0.892 | deleterious | None | None | None | None | N |
V/L | 0.6783 | likely_pathogenic | 0.6772 | pathogenic | -0.958 | Destabilizing | 0.76 | D | 0.526 | neutral | N | 0.519950553 | None | None | N |
V/M | 0.8129 | likely_pathogenic | 0.8037 | pathogenic | -1.229 | Destabilizing | 0.982 | D | 0.707 | prob.neutral | D | 0.549935 | None | None | N |
V/N | 0.9959 | likely_pathogenic | 0.9955 | pathogenic | -2.988 | Highly Destabilizing | 0.998 | D | 0.919 | deleterious | None | None | None | None | N |
V/P | 0.9963 | likely_pathogenic | 0.9962 | pathogenic | -1.505 | Destabilizing | 0.998 | D | 0.901 | deleterious | None | None | None | None | N |
V/Q | 0.9952 | likely_pathogenic | 0.9945 | pathogenic | -2.645 | Highly Destabilizing | 0.998 | D | 0.913 | deleterious | None | None | None | None | N |
V/R | 0.9936 | likely_pathogenic | 0.9929 | pathogenic | -2.291 | Highly Destabilizing | 0.998 | D | 0.924 | deleterious | None | None | None | None | N |
V/S | 0.9815 | likely_pathogenic | 0.9793 | pathogenic | -3.448 | Highly Destabilizing | 0.993 | D | 0.888 | deleterious | None | None | None | None | N |
V/T | 0.9545 | likely_pathogenic | 0.9508 | pathogenic | -2.991 | Highly Destabilizing | 0.953 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/W | 0.999 | likely_pathogenic | 0.9989 | pathogenic | -2.096 | Highly Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
V/Y | 0.9943 | likely_pathogenic | 0.9932 | pathogenic | -1.846 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.