Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30307 | 91144;91145;91146 | chr2:178551981;178551980;178551979 | chr2:179416708;179416707;179416706 |
N2AB | 28666 | 86221;86222;86223 | chr2:178551981;178551980;178551979 | chr2:179416708;179416707;179416706 |
N2A | 27739 | 83440;83441;83442 | chr2:178551981;178551980;178551979 | chr2:179416708;179416707;179416706 |
N2B | 21242 | 63949;63950;63951 | chr2:178551981;178551980;178551979 | chr2:179416708;179416707;179416706 |
Novex-1 | 21367 | 64324;64325;64326 | chr2:178551981;178551980;178551979 | chr2:179416708;179416707;179416706 |
Novex-2 | 21434 | 64525;64526;64527 | chr2:178551981;178551980;178551979 | chr2:179416708;179416707;179416706 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/D | rs1452208068 | -1.252 | 1.0 | N | 0.815 | 0.536 | 0.836410672133 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
V/D | rs1452208068 | -1.252 | 1.0 | N | 0.815 | 0.536 | 0.836410672133 | gnomAD-4.0.0 | 1.59722E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87434E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3225 | likely_benign | 0.3739 | ambiguous | -1.137 | Destabilizing | 0.999 | D | 0.68 | prob.neutral | N | 0.503007917 | None | None | I |
V/C | 0.7616 | likely_pathogenic | 0.7976 | pathogenic | -0.843 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | I |
V/D | 0.6027 | likely_pathogenic | 0.6668 | pathogenic | -0.964 | Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.516649218 | None | None | I |
V/E | 0.4894 | ambiguous | 0.5389 | ambiguous | -1.055 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
V/F | 0.2252 | likely_benign | 0.2706 | benign | -1.228 | Destabilizing | 1.0 | D | 0.798 | deleterious | N | 0.514763706 | None | None | I |
V/G | 0.3866 | ambiguous | 0.4565 | ambiguous | -1.328 | Destabilizing | 1.0 | D | 0.783 | deleterious | N | 0.470453277 | None | None | I |
V/H | 0.7566 | likely_pathogenic | 0.7982 | pathogenic | -0.76 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
V/I | 0.0715 | likely_benign | 0.0759 | benign | -0.753 | Destabilizing | 0.997 | D | 0.598 | neutral | N | 0.447519994 | None | None | I |
V/K | 0.6245 | likely_pathogenic | 0.6498 | pathogenic | -0.757 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
V/L | 0.2623 | likely_benign | 0.3114 | benign | -0.753 | Destabilizing | 0.997 | D | 0.667 | neutral | N | 0.474031804 | None | None | I |
V/M | 0.1815 | likely_benign | 0.2112 | benign | -0.508 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | I |
V/N | 0.4066 | ambiguous | 0.4779 | ambiguous | -0.493 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
V/P | 0.7744 | likely_pathogenic | 0.8282 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
V/Q | 0.5205 | ambiguous | 0.5496 | ambiguous | -0.826 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
V/R | 0.604 | likely_pathogenic | 0.6335 | pathogenic | -0.136 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
V/S | 0.3479 | ambiguous | 0.4115 | ambiguous | -0.936 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | I |
V/T | 0.2804 | likely_benign | 0.3059 | benign | -0.933 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | I |
V/W | 0.893 | likely_pathogenic | 0.924 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
V/Y | 0.6552 | likely_pathogenic | 0.7145 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.