Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3031 | 9316;9317;9318 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
N2AB | 3031 | 9316;9317;9318 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
N2A | 3031 | 9316;9317;9318 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
N2B | 2985 | 9178;9179;9180 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
Novex-1 | 2985 | 9178;9179;9180 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
Novex-2 | 2985 | 9178;9179;9180 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
Novex-3 | 3031 | 9316;9317;9318 | chr2:178768745;178768744;178768743 | chr2:179633472;179633471;179633470 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/L | None | None | 1.0 | N | 0.777 | 0.576 | 0.733802170352 | gnomAD-4.0.0 | 1.5906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85649E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.785 | likely_pathogenic | 0.7133 | pathogenic | -0.097 | Destabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
H/C | 0.5923 | likely_pathogenic | 0.5361 | ambiguous | 0.588 | Stabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
H/D | 0.7967 | likely_pathogenic | 0.7062 | pathogenic | -0.102 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.495881945 | None | None | N |
H/E | 0.8943 | likely_pathogenic | 0.8347 | pathogenic | -0.035 | Destabilizing | 0.999 | D | 0.524 | neutral | None | None | None | None | N |
H/F | 0.7101 | likely_pathogenic | 0.6877 | pathogenic | 0.836 | Stabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
H/G | 0.8004 | likely_pathogenic | 0.7357 | pathogenic | -0.446 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
H/I | 0.8995 | likely_pathogenic | 0.8344 | pathogenic | 0.836 | Stabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
H/K | 0.8133 | likely_pathogenic | 0.7525 | pathogenic | -0.044 | Destabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
H/L | 0.4353 | ambiguous | 0.3485 | ambiguous | 0.836 | Stabilizing | 1.0 | D | 0.777 | deleterious | N | 0.498678418 | None | None | N |
H/M | 0.8878 | likely_pathogenic | 0.8451 | pathogenic | 0.649 | Stabilizing | 1.0 | D | 0.768 | deleterious | None | None | None | None | N |
H/N | 0.3617 | ambiguous | 0.2722 | benign | -0.045 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.4845441 | None | None | N |
H/P | 0.8083 | likely_pathogenic | 0.7115 | pathogenic | 0.55 | Stabilizing | 1.0 | D | 0.783 | deleterious | N | 0.50733238 | None | None | N |
H/Q | 0.679 | likely_pathogenic | 0.5708 | pathogenic | 0.153 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.472300323 | None | None | N |
H/R | 0.5099 | ambiguous | 0.4016 | ambiguous | -0.723 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | N | 0.459257519 | None | None | N |
H/S | 0.6376 | likely_pathogenic | 0.5278 | ambiguous | 0.005 | Stabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
H/T | 0.8133 | likely_pathogenic | 0.7067 | pathogenic | 0.18 | Stabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
H/V | 0.8456 | likely_pathogenic | 0.7624 | pathogenic | 0.55 | Stabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
H/W | 0.8513 | likely_pathogenic | 0.8211 | pathogenic | 0.952 | Stabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
H/Y | 0.386 | ambiguous | 0.3323 | benign | 1.163 | Stabilizing | 0.999 | D | 0.513 | neutral | N | 0.502866067 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.