Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30310 | 91153;91154;91155 | chr2:178551972;178551971;178551970 | chr2:179416699;179416698;179416697 |
N2AB | 28669 | 86230;86231;86232 | chr2:178551972;178551971;178551970 | chr2:179416699;179416698;179416697 |
N2A | 27742 | 83449;83450;83451 | chr2:178551972;178551971;178551970 | chr2:179416699;179416698;179416697 |
N2B | 21245 | 63958;63959;63960 | chr2:178551972;178551971;178551970 | chr2:179416699;179416698;179416697 |
Novex-1 | 21370 | 64333;64334;64335 | chr2:178551972;178551971;178551970 | chr2:179416699;179416698;179416697 |
Novex-2 | 21437 | 64534;64535;64536 | chr2:178551972;178551971;178551970 | chr2:179416699;179416698;179416697 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.89 | N | 0.685 | 0.444 | 0.677296958874 | gnomAD-4.0.0 | 1.59631E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87219E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1087 | likely_benign | 0.1289 | benign | -1.622 | Destabilizing | 0.014 | N | 0.427 | neutral | N | 0.464390118 | None | None | I |
P/C | 0.6409 | likely_pathogenic | 0.7297 | pathogenic | -0.968 | Destabilizing | 0.994 | D | 0.745 | deleterious | None | None | None | None | I |
P/D | 0.8039 | likely_pathogenic | 0.8614 | pathogenic | -1.713 | Destabilizing | 0.956 | D | 0.649 | neutral | None | None | None | None | I |
P/E | 0.6879 | likely_pathogenic | 0.747 | pathogenic | -1.717 | Destabilizing | 0.86 | D | 0.613 | neutral | None | None | None | None | I |
P/F | 0.7056 | likely_pathogenic | 0.788 | pathogenic | -1.226 | Destabilizing | 0.978 | D | 0.747 | deleterious | None | None | None | None | I |
P/G | 0.405 | ambiguous | 0.4811 | ambiguous | -1.928 | Destabilizing | 0.754 | D | 0.554 | neutral | None | None | None | None | I |
P/H | 0.512 | ambiguous | 0.6081 | pathogenic | -1.458 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/I | 0.7011 | likely_pathogenic | 0.7788 | pathogenic | -0.873 | Destabilizing | 0.956 | D | 0.734 | prob.delet. | None | None | None | None | I |
P/K | 0.9055 | likely_pathogenic | 0.9371 | pathogenic | -1.496 | Destabilizing | 0.86 | D | 0.62 | neutral | None | None | None | None | I |
P/L | 0.4751 | ambiguous | 0.5927 | pathogenic | -0.873 | Destabilizing | 0.89 | D | 0.685 | prob.neutral | N | 0.520664666 | None | None | I |
P/M | 0.6524 | likely_pathogenic | 0.7437 | pathogenic | -0.609 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | I |
P/N | 0.6509 | likely_pathogenic | 0.7639 | pathogenic | -1.257 | Destabilizing | 0.956 | D | 0.675 | neutral | None | None | None | None | I |
P/Q | 0.5696 | likely_pathogenic | 0.6773 | pathogenic | -1.456 | Destabilizing | 0.97 | D | 0.699 | prob.neutral | D | 0.534048887 | None | None | I |
P/R | 0.8361 | likely_pathogenic | 0.8915 | pathogenic | -0.872 | Destabilizing | 0.97 | D | 0.693 | prob.neutral | D | 0.533541908 | None | None | I |
P/S | 0.2015 | likely_benign | 0.2583 | benign | -1.702 | Destabilizing | 0.153 | N | 0.358 | neutral | N | 0.495180578 | None | None | I |
P/T | 0.3042 | likely_benign | 0.3834 | ambiguous | -1.613 | Destabilizing | 0.698 | D | 0.557 | neutral | D | 0.533795398 | None | None | I |
P/V | 0.5189 | ambiguous | 0.6112 | pathogenic | -1.09 | Destabilizing | 0.915 | D | 0.64 | neutral | None | None | None | None | I |
P/W | 0.8607 | likely_pathogenic | 0.9018 | pathogenic | -1.427 | Destabilizing | 0.998 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/Y | 0.685 | likely_pathogenic | 0.7577 | pathogenic | -1.178 | Destabilizing | 0.993 | D | 0.749 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.