Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30315 | 91168;91169;91170 | chr2:178551957;178551956;178551955 | chr2:179416684;179416683;179416682 |
N2AB | 28674 | 86245;86246;86247 | chr2:178551957;178551956;178551955 | chr2:179416684;179416683;179416682 |
N2A | 27747 | 83464;83465;83466 | chr2:178551957;178551956;178551955 | chr2:179416684;179416683;179416682 |
N2B | 21250 | 63973;63974;63975 | chr2:178551957;178551956;178551955 | chr2:179416684;179416683;179416682 |
Novex-1 | 21375 | 64348;64349;64350 | chr2:178551957;178551956;178551955 | chr2:179416684;179416683;179416682 |
Novex-2 | 21442 | 64549;64550;64551 | chr2:178551957;178551956;178551955 | chr2:179416684;179416683;179416682 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs755698637 | -0.572 | None | N | 0.089 | 0.112 | 0.402614778071 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
I/T | rs755698637 | -0.572 | None | N | 0.089 | 0.112 | 0.402614778071 | gnomAD-4.0.0 | 2.73899E-06 | None | None | None | None | I | None | 8.96647E-05 | 0 | None | 0 | 2.52143E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1218 | likely_benign | 0.1299 | benign | -1.015 | Destabilizing | 0.002 | N | 0.165 | neutral | None | None | None | None | I |
I/C | 0.3322 | likely_benign | 0.3874 | ambiguous | -0.822 | Destabilizing | 0.131 | N | 0.289 | neutral | None | None | None | None | I |
I/D | 0.2653 | likely_benign | 0.2681 | benign | -0.119 | Destabilizing | None | N | 0.152 | neutral | None | None | None | None | I |
I/E | 0.2655 | likely_benign | 0.2667 | benign | -0.149 | Destabilizing | None | N | 0.166 | neutral | None | None | None | None | I |
I/F | 0.1268 | likely_benign | 0.1643 | benign | -0.656 | Destabilizing | 0.008 | N | 0.335 | neutral | N | 0.444048119 | None | None | I |
I/G | 0.2922 | likely_benign | 0.3089 | benign | -1.269 | Destabilizing | 0.009 | N | 0.411 | neutral | None | None | None | None | I |
I/H | 0.2363 | likely_benign | 0.2728 | benign | -0.348 | Destabilizing | 0.131 | N | 0.392 | neutral | None | None | None | None | I |
I/K | 0.186 | likely_benign | 0.2097 | benign | -0.554 | Destabilizing | 0.004 | N | 0.401 | neutral | None | None | None | None | I |
I/L | 0.0834 | likely_benign | 0.0948 | benign | -0.429 | Destabilizing | None | N | 0.096 | neutral | N | 0.395139451 | None | None | I |
I/M | 0.0821 | likely_benign | 0.0917 | benign | -0.5 | Destabilizing | 0.027 | N | 0.322 | neutral | N | 0.445088269 | None | None | I |
I/N | 0.0971 | likely_benign | 0.0951 | benign | -0.436 | Destabilizing | 0.008 | N | 0.505 | neutral | N | 0.393526085 | None | None | I |
I/P | 0.2478 | likely_benign | 0.263 | benign | -0.59 | Destabilizing | 0.041 | N | 0.551 | neutral | None | None | None | None | I |
I/Q | 0.2159 | likely_benign | 0.2283 | benign | -0.594 | Destabilizing | 0.01 | N | 0.535 | neutral | None | None | None | None | I |
I/R | 0.1609 | likely_benign | 0.1919 | benign | -0.011 | Destabilizing | 0.021 | N | 0.567 | neutral | None | None | None | None | I |
I/S | 0.1122 | likely_benign | 0.1103 | benign | -1.044 | Destabilizing | 0.003 | N | 0.251 | neutral | N | 0.37863399 | None | None | I |
I/T | 0.0975 | likely_benign | 0.1076 | benign | -0.952 | Destabilizing | None | N | 0.089 | neutral | N | 0.367070203 | None | None | I |
I/V | 0.0544 | likely_benign | 0.0561 | benign | -0.59 | Destabilizing | None | N | 0.075 | neutral | N | 0.41285842 | None | None | I |
I/W | 0.6696 | likely_pathogenic | 0.7526 | pathogenic | -0.663 | Destabilizing | 0.633 | D | 0.338 | neutral | None | None | None | None | I |
I/Y | 0.326 | likely_benign | 0.3787 | ambiguous | -0.43 | Destabilizing | 0.131 | N | 0.425 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.