Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30318 | 91177;91178;91179 | chr2:178551948;178551947;178551946 | chr2:179416675;179416674;179416673 |
N2AB | 28677 | 86254;86255;86256 | chr2:178551948;178551947;178551946 | chr2:179416675;179416674;179416673 |
N2A | 27750 | 83473;83474;83475 | chr2:178551948;178551947;178551946 | chr2:179416675;179416674;179416673 |
N2B | 21253 | 63982;63983;63984 | chr2:178551948;178551947;178551946 | chr2:179416675;179416674;179416673 |
Novex-1 | 21378 | 64357;64358;64359 | chr2:178551948;178551947;178551946 | chr2:179416675;179416674;179416673 |
Novex-2 | 21445 | 64558;64559;64560 | chr2:178551948;178551947;178551946 | chr2:179416675;179416674;179416673 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | rs774212641 | -1.326 | 0.999 | D | 0.669 | 0.412 | 0.624893835469 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/G | rs774212641 | -1.326 | 0.999 | D | 0.669 | 0.412 | 0.624893835469 | gnomAD-4.0.0 | 3.18606E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 2.86318E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6856 | likely_pathogenic | 0.7017 | pathogenic | -1.57 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
A/D | 0.9945 | likely_pathogenic | 0.9961 | pathogenic | -2.612 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
A/E | 0.9822 | likely_pathogenic | 0.9867 | pathogenic | -2.495 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.542326634 | None | None | I |
A/F | 0.9417 | likely_pathogenic | 0.9616 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | I |
A/G | 0.5106 | ambiguous | 0.5933 | pathogenic | -1.689 | Destabilizing | 0.999 | D | 0.669 | prob.neutral | D | 0.524729358 | None | None | I |
A/H | 0.9936 | likely_pathogenic | 0.9952 | pathogenic | -1.886 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
A/I | 0.5115 | ambiguous | 0.5853 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
A/K | 0.994 | likely_pathogenic | 0.9957 | pathogenic | -1.489 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
A/L | 0.5686 | likely_pathogenic | 0.5968 | pathogenic | -0.335 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | I |
A/M | 0.6986 | likely_pathogenic | 0.7755 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
A/N | 0.9633 | likely_pathogenic | 0.9715 | pathogenic | -1.66 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
A/P | 0.6552 | likely_pathogenic | 0.7257 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.848 | deleterious | N | 0.515575098 | None | None | I |
A/Q | 0.9663 | likely_pathogenic | 0.9751 | pathogenic | -1.636 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
A/R | 0.983 | likely_pathogenic | 0.9859 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
A/S | 0.3359 | likely_benign | 0.3787 | ambiguous | -2.019 | Highly Destabilizing | 0.999 | D | 0.707 | prob.delet. | D | 0.529538297 | None | None | I |
A/T | 0.3751 | ambiguous | 0.4486 | ambiguous | -1.801 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.48811232 | None | None | I |
A/V | 0.2631 | likely_benign | 0.3344 | benign | -0.619 | Destabilizing | 0.999 | D | 0.826 | deleterious | D | 0.53423298 | None | None | I |
A/W | 0.996 | likely_pathogenic | 0.9971 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
A/Y | 0.9868 | likely_pathogenic | 0.991 | pathogenic | -1.145 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.