Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30320 | 91183;91184;91185 | chr2:178551942;178551941;178551940 | chr2:179416669;179416668;179416667 |
N2AB | 28679 | 86260;86261;86262 | chr2:178551942;178551941;178551940 | chr2:179416669;179416668;179416667 |
N2A | 27752 | 83479;83480;83481 | chr2:178551942;178551941;178551940 | chr2:179416669;179416668;179416667 |
N2B | 21255 | 63988;63989;63990 | chr2:178551942;178551941;178551940 | chr2:179416669;179416668;179416667 |
Novex-1 | 21380 | 64363;64364;64365 | chr2:178551942;178551941;178551940 | chr2:179416669;179416668;179416667 |
Novex-2 | 21447 | 64564;64565;64566 | chr2:178551942;178551941;178551940 | chr2:179416669;179416668;179416667 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | rs1244743041 | 0.028 | 0.999 | D | 0.672 | 0.413 | 0.360565625551 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/R | rs1244743041 | 0.028 | 0.999 | D | 0.672 | 0.413 | 0.360565625551 | gnomAD-4.0.0 | 6.19918E-06 | None | None | None | None | N | None | 2.6698E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 6.78369E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.8195 | likely_pathogenic | 0.8841 | pathogenic | 0.598 | Stabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | N |
H/C | 0.5687 | likely_pathogenic | 0.6459 | pathogenic | 1.092 | Stabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
H/D | 0.5206 | ambiguous | 0.5922 | pathogenic | 0.077 | Stabilizing | 0.999 | D | 0.635 | neutral | N | 0.472928231 | None | None | N |
H/E | 0.7681 | likely_pathogenic | 0.8508 | pathogenic | 0.103 | Stabilizing | 0.998 | D | 0.587 | neutral | None | None | None | None | N |
H/F | 0.6611 | likely_pathogenic | 0.7543 | pathogenic | 1.242 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | N |
H/G | 0.7869 | likely_pathogenic | 0.8514 | pathogenic | 0.308 | Stabilizing | 0.998 | D | 0.512 | neutral | None | None | None | None | N |
H/I | 0.8767 | likely_pathogenic | 0.9403 | pathogenic | 1.333 | Stabilizing | 0.999 | D | 0.814 | deleterious | None | None | None | None | N |
H/K | 0.8653 | likely_pathogenic | 0.9125 | pathogenic | 0.586 | Stabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
H/L | 0.4054 | ambiguous | 0.5287 | ambiguous | 1.333 | Stabilizing | 0.999 | D | 0.739 | deleterious | N | 0.520258031 | None | None | N |
H/M | 0.8596 | likely_pathogenic | 0.909 | pathogenic | 1.038 | Stabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
H/N | 0.2116 | likely_benign | 0.2643 | benign | 0.622 | Stabilizing | 0.997 | D | 0.588 | neutral | N | 0.488993762 | None | None | N |
H/P | 0.3143 | likely_benign | 0.4251 | ambiguous | 1.115 | Stabilizing | 0.999 | D | 0.752 | deleterious | N | 0.486561248 | None | None | N |
H/Q | 0.6616 | likely_pathogenic | 0.7769 | pathogenic | 0.725 | Stabilizing | 0.999 | D | 0.687 | prob.delet. | N | 0.480013882 | None | None | N |
H/R | 0.6823 | likely_pathogenic | 0.793 | pathogenic | -0.121 | Destabilizing | 0.999 | D | 0.672 | prob.neutral | D | 0.528416155 | None | None | N |
H/S | 0.5847 | likely_pathogenic | 0.6467 | pathogenic | 0.795 | Stabilizing | 0.999 | D | 0.611 | neutral | None | None | None | None | N |
H/T | 0.8054 | likely_pathogenic | 0.864 | pathogenic | 0.919 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
H/V | 0.8487 | likely_pathogenic | 0.9163 | pathogenic | 1.115 | Stabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
H/W | 0.6886 | likely_pathogenic | 0.7571 | pathogenic | 1.182 | Stabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
H/Y | 0.2022 | likely_benign | 0.2884 | benign | 1.488 | Stabilizing | 0.997 | D | 0.55 | neutral | N | 0.487801683 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.