Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30326 | 91201;91202;91203 | chr2:178551924;178551923;178551922 | chr2:179416651;179416650;179416649 |
N2AB | 28685 | 86278;86279;86280 | chr2:178551924;178551923;178551922 | chr2:179416651;179416650;179416649 |
N2A | 27758 | 83497;83498;83499 | chr2:178551924;178551923;178551922 | chr2:179416651;179416650;179416649 |
N2B | 21261 | 64006;64007;64008 | chr2:178551924;178551923;178551922 | chr2:179416651;179416650;179416649 |
Novex-1 | 21386 | 64381;64382;64383 | chr2:178551924;178551923;178551922 | chr2:179416651;179416650;179416649 |
Novex-2 | 21453 | 64582;64583;64584 | chr2:178551924;178551923;178551922 | chr2:179416651;179416650;179416649 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1193099278 | -0.038 | 1.0 | N | 0.843 | 0.48 | 0.774184965001 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.88E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2242 | likely_benign | 0.3112 | benign | -0.823 | Destabilizing | 1.0 | D | 0.659 | neutral | N | 0.481052795 | None | None | N |
G/C | 0.462 | ambiguous | 0.5997 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.519035732 | None | None | N |
G/D | 0.7482 | likely_pathogenic | 0.8076 | pathogenic | -1.674 | Destabilizing | 1.0 | D | 0.803 | deleterious | N | 0.490598767 | None | None | N |
G/E | 0.7099 | likely_pathogenic | 0.7906 | pathogenic | -1.694 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
G/F | 0.8189 | likely_pathogenic | 0.9045 | pathogenic | -1.077 | Destabilizing | 1.0 | D | 0.826 | deleterious | None | None | None | None | N |
G/H | 0.8103 | likely_pathogenic | 0.891 | pathogenic | -1.346 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
G/I | 0.7094 | likely_pathogenic | 0.8468 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
G/K | 0.8633 | likely_pathogenic | 0.9208 | pathogenic | -1.188 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
G/L | 0.6891 | likely_pathogenic | 0.8066 | pathogenic | -0.383 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | N |
G/M | 0.7707 | likely_pathogenic | 0.8617 | pathogenic | -0.508 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
G/N | 0.7003 | likely_pathogenic | 0.7688 | pathogenic | -1.041 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
G/P | 0.9756 | likely_pathogenic | 0.9853 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
G/Q | 0.7344 | likely_pathogenic | 0.8266 | pathogenic | -1.221 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
G/R | 0.7827 | likely_pathogenic | 0.8717 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.825 | deleterious | N | 0.488307724 | None | None | N |
G/S | 0.1503 | likely_benign | 0.1915 | benign | -1.306 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.504871999 | None | None | N |
G/T | 0.4462 | ambiguous | 0.5551 | ambiguous | -1.251 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
G/V | 0.5846 | likely_pathogenic | 0.757 | pathogenic | -0.49 | Destabilizing | 1.0 | D | 0.843 | deleterious | N | 0.500677987 | None | None | N |
G/W | 0.808 | likely_pathogenic | 0.8941 | pathogenic | -1.443 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | N |
G/Y | 0.744 | likely_pathogenic | 0.8693 | pathogenic | -1.013 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.