Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30329 | 91210;91211;91212 | chr2:178551915;178551914;178551913 | chr2:179416642;179416641;179416640 |
N2AB | 28688 | 86287;86288;86289 | chr2:178551915;178551914;178551913 | chr2:179416642;179416641;179416640 |
N2A | 27761 | 83506;83507;83508 | chr2:178551915;178551914;178551913 | chr2:179416642;179416641;179416640 |
N2B | 21264 | 64015;64016;64017 | chr2:178551915;178551914;178551913 | chr2:179416642;179416641;179416640 |
Novex-1 | 21389 | 64390;64391;64392 | chr2:178551915;178551914;178551913 | chr2:179416642;179416641;179416640 |
Novex-2 | 21456 | 64591;64592;64593 | chr2:178551915;178551914;178551913 | chr2:179416642;179416641;179416640 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1178018014 | -1.042 | 1.0 | N | 0.907 | 0.441 | 0.60359086051 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
G/R | rs1178018014 | -1.042 | 1.0 | N | 0.907 | 0.441 | 0.60359086051 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 7.32654E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.221 | likely_benign | 0.2627 | benign | -0.848 | Destabilizing | 0.974 | D | 0.509 | neutral | N | 0.508629954 | None | None | N |
G/C | 0.3981 | ambiguous | 0.4608 | ambiguous | -1.185 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
G/D | 0.7426 | likely_pathogenic | 0.7688 | pathogenic | -2.198 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
G/E | 0.635 | likely_pathogenic | 0.6761 | pathogenic | -2.158 | Highly Destabilizing | 1.0 | D | 0.882 | deleterious | N | 0.492350993 | None | None | N |
G/F | 0.8915 | likely_pathogenic | 0.9195 | pathogenic | -0.993 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
G/H | 0.7932 | likely_pathogenic | 0.8312 | pathogenic | -1.821 | Destabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | N |
G/I | 0.7218 | likely_pathogenic | 0.8029 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
G/K | 0.7705 | likely_pathogenic | 0.819 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
G/L | 0.7099 | likely_pathogenic | 0.7608 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
G/M | 0.7717 | likely_pathogenic | 0.8138 | pathogenic | -0.219 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
G/N | 0.6459 | likely_pathogenic | 0.6772 | pathogenic | -1.389 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
G/P | 0.9314 | likely_pathogenic | 0.9487 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.909 | deleterious | None | None | None | None | N |
G/Q | 0.599 | likely_pathogenic | 0.6445 | pathogenic | -1.442 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
G/R | 0.6095 | likely_pathogenic | 0.687 | pathogenic | -1.325 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.466707522 | None | None | N |
G/S | 0.1573 | likely_benign | 0.1783 | benign | -1.608 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
G/T | 0.3546 | ambiguous | 0.4062 | ambiguous | -1.487 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
G/V | 0.5346 | ambiguous | 0.6251 | pathogenic | -0.34 | Destabilizing | 1.0 | D | 0.883 | deleterious | N | 0.471977896 | None | None | N |
G/W | 0.836 | likely_pathogenic | 0.8865 | pathogenic | -1.608 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
G/Y | 0.8295 | likely_pathogenic | 0.8782 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.