Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30333 | 91222;91223;91224 | chr2:178551903;178551902;178551901 | chr2:179416630;179416629;179416628 |
N2AB | 28692 | 86299;86300;86301 | chr2:178551903;178551902;178551901 | chr2:179416630;179416629;179416628 |
N2A | 27765 | 83518;83519;83520 | chr2:178551903;178551902;178551901 | chr2:179416630;179416629;179416628 |
N2B | 21268 | 64027;64028;64029 | chr2:178551903;178551902;178551901 | chr2:179416630;179416629;179416628 |
Novex-1 | 21393 | 64402;64403;64404 | chr2:178551903;178551902;178551901 | chr2:179416630;179416629;179416628 |
Novex-2 | 21460 | 64603;64604;64605 | chr2:178551903;178551902;178551901 | chr2:179416630;179416629;179416628 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.171 | N | 0.537 | 0.157 | 0.512192450023 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/T | rs755369653 | None | None | N | 0.292 | 0.142 | 0.594537789615 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs755369653 | None | None | N | 0.292 | 0.142 | 0.594537789615 | gnomAD-4.0.0 | 1.6112E-05 | None | None | None | None | I | None | 1.33486E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.11905E-05 | 0 | 0 |
I/V | None | None | None | N | 0.123 | 0.047 | 0.273503213844 | gnomAD-4.0.0 | 3.18249E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85843E-06 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.315 | likely_benign | 0.3327 | benign | -2.072 | Highly Destabilizing | None | N | 0.328 | neutral | None | None | None | None | I |
I/C | 0.6365 | likely_pathogenic | 0.6164 | pathogenic | -1.256 | Destabilizing | 0.356 | N | 0.591 | neutral | None | None | None | None | I |
I/D | 0.9407 | likely_pathogenic | 0.9317 | pathogenic | -1.772 | Destabilizing | 0.072 | N | 0.675 | neutral | None | None | None | None | I |
I/E | 0.9033 | likely_pathogenic | 0.8912 | pathogenic | -1.584 | Destabilizing | 0.072 | N | 0.619 | neutral | None | None | None | None | I |
I/F | 0.4145 | ambiguous | 0.3909 | ambiguous | -1.123 | Destabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | I |
I/G | 0.7444 | likely_pathogenic | 0.7447 | pathogenic | -2.585 | Highly Destabilizing | 0.031 | N | 0.485 | neutral | None | None | None | None | I |
I/H | 0.8754 | likely_pathogenic | 0.8632 | pathogenic | -1.964 | Destabilizing | 0.628 | D | 0.671 | neutral | None | None | None | None | I |
I/K | 0.8663 | likely_pathogenic | 0.8604 | pathogenic | -1.399 | Destabilizing | 0.055 | N | 0.625 | neutral | N | 0.503123977 | None | None | I |
I/L | 0.1588 | likely_benign | 0.1462 | benign | -0.625 | Destabilizing | 0.002 | N | 0.379 | neutral | N | 0.485041019 | None | None | I |
I/M | 0.1895 | likely_benign | 0.189 | benign | -0.554 | Destabilizing | 0.171 | N | 0.537 | neutral | N | 0.479739803 | None | None | I |
I/N | 0.5546 | ambiguous | 0.5571 | ambiguous | -1.573 | Destabilizing | 0.214 | N | 0.709 | prob.delet. | None | None | None | None | I |
I/P | 0.5999 | likely_pathogenic | 0.5452 | ambiguous | -1.083 | Destabilizing | 0.136 | N | 0.685 | prob.neutral | None | None | None | None | I |
I/Q | 0.8302 | likely_pathogenic | 0.8155 | pathogenic | -1.472 | Destabilizing | 0.356 | N | 0.709 | prob.delet. | None | None | None | None | I |
I/R | 0.8027 | likely_pathogenic | 0.7888 | pathogenic | -1.156 | Destabilizing | 0.171 | N | 0.715 | prob.delet. | N | 0.514480283 | None | None | I |
I/S | 0.4222 | ambiguous | 0.4435 | ambiguous | -2.328 | Highly Destabilizing | 0.016 | N | 0.441 | neutral | None | None | None | None | I |
I/T | 0.2139 | likely_benign | 0.2535 | benign | -1.996 | Destabilizing | None | N | 0.292 | neutral | N | 0.4747266 | None | None | I |
I/V | 0.0577 | likely_benign | 0.0597 | benign | -1.083 | Destabilizing | None | N | 0.123 | neutral | N | 0.40686545 | None | None | I |
I/W | 0.9548 | likely_pathogenic | 0.9482 | pathogenic | -1.435 | Destabilizing | 0.864 | D | 0.682 | prob.neutral | None | None | None | None | I |
I/Y | 0.8252 | likely_pathogenic | 0.8028 | pathogenic | -1.121 | Destabilizing | 0.356 | N | 0.645 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.