Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30336 | 91231;91232;91233 | chr2:178551894;178551893;178551892 | chr2:179416621;179416620;179416619 |
N2AB | 28695 | 86308;86309;86310 | chr2:178551894;178551893;178551892 | chr2:179416621;179416620;179416619 |
N2A | 27768 | 83527;83528;83529 | chr2:178551894;178551893;178551892 | chr2:179416621;179416620;179416619 |
N2B | 21271 | 64036;64037;64038 | chr2:178551894;178551893;178551892 | chr2:179416621;179416620;179416619 |
Novex-1 | 21396 | 64411;64412;64413 | chr2:178551894;178551893;178551892 | chr2:179416621;179416620;179416619 |
Novex-2 | 21463 | 64612;64613;64614 | chr2:178551894;178551893;178551892 | chr2:179416621;179416620;179416619 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.645 | D | 0.423 | 0.324 | 0.585564602418 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.407 | ambiguous | 0.4555 | ambiguous | -1.152 | Destabilizing | 0.645 | D | 0.423 | neutral | D | 0.524351555 | None | None | I |
V/C | 0.8413 | likely_pathogenic | 0.8382 | pathogenic | -1.301 | Destabilizing | 0.995 | D | 0.62 | neutral | None | None | None | None | I |
V/D | 0.9034 | likely_pathogenic | 0.9052 | pathogenic | -2.019 | Highly Destabilizing | 0.945 | D | 0.75 | deleterious | None | None | None | None | I |
V/E | 0.7973 | likely_pathogenic | 0.7786 | pathogenic | -2.062 | Highly Destabilizing | 0.928 | D | 0.683 | prob.neutral | N | 0.510885885 | None | None | I |
V/F | 0.5251 | ambiguous | 0.5206 | ambiguous | -1.371 | Destabilizing | 0.894 | D | 0.64 | neutral | None | None | None | None | I |
V/G | 0.6441 | likely_pathogenic | 0.6569 | pathogenic | -1.369 | Destabilizing | 0.928 | D | 0.743 | deleterious | N | 0.507633882 | None | None | I |
V/H | 0.9112 | likely_pathogenic | 0.8994 | pathogenic | -0.984 | Destabilizing | 0.995 | D | 0.727 | prob.delet. | None | None | None | None | I |
V/I | 0.0755 | likely_benign | 0.0775 | benign | -0.667 | Destabilizing | 0.003 | N | 0.176 | neutral | None | None | None | None | I |
V/K | 0.7863 | likely_pathogenic | 0.7521 | pathogenic | -0.942 | Destabilizing | 0.945 | D | 0.688 | prob.neutral | None | None | None | None | I |
V/L | 0.4732 | ambiguous | 0.4827 | ambiguous | -0.667 | Destabilizing | 0.114 | N | 0.299 | neutral | N | 0.474068264 | None | None | I |
V/M | 0.2969 | likely_benign | 0.3021 | benign | -0.574 | Destabilizing | 0.864 | D | 0.574 | neutral | N | 0.482439283 | None | None | I |
V/N | 0.6814 | likely_pathogenic | 0.7059 | pathogenic | -0.941 | Destabilizing | 0.981 | D | 0.741 | deleterious | None | None | None | None | I |
V/P | 0.8569 | likely_pathogenic | 0.8817 | pathogenic | -0.798 | Destabilizing | 0.981 | D | 0.697 | prob.neutral | None | None | None | None | I |
V/Q | 0.7367 | likely_pathogenic | 0.7004 | pathogenic | -1.253 | Destabilizing | 0.981 | D | 0.685 | prob.neutral | None | None | None | None | I |
V/R | 0.7397 | likely_pathogenic | 0.6899 | pathogenic | -0.437 | Destabilizing | 0.945 | D | 0.738 | prob.delet. | None | None | None | None | I |
V/S | 0.5512 | ambiguous | 0.5941 | pathogenic | -1.288 | Destabilizing | 0.945 | D | 0.681 | prob.neutral | None | None | None | None | I |
V/T | 0.3653 | ambiguous | 0.3991 | ambiguous | -1.238 | Destabilizing | 0.707 | D | 0.513 | neutral | None | None | None | None | I |
V/W | 0.9764 | likely_pathogenic | 0.9744 | pathogenic | -1.537 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | None | None | None | None | I |
V/Y | 0.8843 | likely_pathogenic | 0.874 | pathogenic | -1.15 | Destabilizing | 0.945 | D | 0.649 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.