Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3034 | 9325;9326;9327 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
N2AB | 3034 | 9325;9326;9327 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
N2A | 3034 | 9325;9326;9327 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
N2B | 2988 | 9187;9188;9189 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
Novex-1 | 2988 | 9187;9188;9189 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
Novex-2 | 2988 | 9187;9188;9189 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
Novex-3 | 3034 | 9325;9326;9327 | chr2:178768736;178768735;178768734 | chr2:179633463;179633462;179633461 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.994 | D | 0.883 | 0.874 | 0.843089832369 | gnomAD-4.0.0 | 3.18129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.7635E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.9894 | likely_pathogenic | 0.9827 | pathogenic | 0.225 | Stabilizing | 0.919 | D | 0.784 | deleterious | D | 0.72974757 | None | None | N |
D/C | 0.9977 | likely_pathogenic | 0.9969 | pathogenic | 0.067 | Stabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
D/E | 0.9627 | likely_pathogenic | 0.9417 | pathogenic | -0.861 | Destabilizing | 0.979 | D | 0.605 | neutral | D | 0.730805165 | None | None | N |
D/F | 0.9951 | likely_pathogenic | 0.9919 | pathogenic | 0.851 | Stabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | N |
D/G | 0.9936 | likely_pathogenic | 0.988 | pathogenic | -0.226 | Destabilizing | 0.067 | N | 0.479 | neutral | D | 0.729006433 | None | None | N |
D/H | 0.9858 | likely_pathogenic | 0.98 | pathogenic | 0.383 | Stabilizing | 0.999 | D | 0.813 | deleterious | D | 0.623681428 | None | None | N |
D/I | 0.9969 | likely_pathogenic | 0.9951 | pathogenic | 1.437 | Stabilizing | 0.998 | D | 0.885 | deleterious | None | None | None | None | N |
D/K | 0.9968 | likely_pathogenic | 0.9952 | pathogenic | -0.353 | Destabilizing | 0.991 | D | 0.83 | deleterious | None | None | None | None | N |
D/L | 0.9929 | likely_pathogenic | 0.9899 | pathogenic | 1.437 | Stabilizing | 0.995 | D | 0.881 | deleterious | None | None | None | None | N |
D/M | 0.9965 | likely_pathogenic | 0.9948 | pathogenic | 1.823 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
D/N | 0.9296 | likely_pathogenic | 0.8929 | pathogenic | -1.019 | Destabilizing | 0.988 | D | 0.752 | deleterious | D | 0.693665427 | None | None | N |
D/P | 0.9996 | likely_pathogenic | 0.9995 | pathogenic | 1.063 | Stabilizing | 0.998 | D | 0.833 | deleterious | None | None | None | None | N |
D/Q | 0.994 | likely_pathogenic | 0.9898 | pathogenic | -0.683 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
D/R | 0.9977 | likely_pathogenic | 0.9961 | pathogenic | -0.265 | Destabilizing | 0.995 | D | 0.866 | deleterious | None | None | None | None | N |
D/S | 0.979 | likely_pathogenic | 0.9609 | pathogenic | -1.275 | Destabilizing | 0.968 | D | 0.649 | neutral | None | None | None | None | N |
D/T | 0.9957 | likely_pathogenic | 0.9929 | pathogenic | -0.88 | Destabilizing | 0.995 | D | 0.831 | deleterious | None | None | None | None | N |
D/V | 0.9893 | likely_pathogenic | 0.9842 | pathogenic | 1.063 | Stabilizing | 0.994 | D | 0.883 | deleterious | D | 0.729007926 | None | None | N |
D/W | 0.9993 | likely_pathogenic | 0.9988 | pathogenic | 0.826 | Stabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
D/Y | 0.971 | likely_pathogenic | 0.9507 | pathogenic | 1.047 | Stabilizing | 0.999 | D | 0.885 | deleterious | D | 0.729087228 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.