Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30359 | 91300;91301;91302 | chr2:178551825;178551824;178551823 | chr2:179416552;179416551;179416550 |
N2AB | 28718 | 86377;86378;86379 | chr2:178551825;178551824;178551823 | chr2:179416552;179416551;179416550 |
N2A | 27791 | 83596;83597;83598 | chr2:178551825;178551824;178551823 | chr2:179416552;179416551;179416550 |
N2B | 21294 | 64105;64106;64107 | chr2:178551825;178551824;178551823 | chr2:179416552;179416551;179416550 |
Novex-1 | 21419 | 64480;64481;64482 | chr2:178551825;178551824;178551823 | chr2:179416552;179416551;179416550 |
Novex-2 | 21486 | 64681;64682;64683 | chr2:178551825;178551824;178551823 | chr2:179416552;179416551;179416550 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1312420792 | -2.133 | 0.055 | N | 0.689 | 0.493 | 0.39724302092 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
F/L | rs1312420792 | -2.133 | 0.055 | N | 0.689 | 0.493 | 0.39724302092 | gnomAD-4.0.0 | 1.59111E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9836 | likely_pathogenic | 0.9859 | pathogenic | -3.274 | Highly Destabilizing | 0.272 | N | 0.805 | deleterious | None | None | None | None | N |
F/C | 0.768 | likely_pathogenic | 0.8028 | pathogenic | -2.015 | Highly Destabilizing | 0.958 | D | 0.873 | deleterious | N | 0.482142432 | None | None | N |
F/D | 0.9966 | likely_pathogenic | 0.997 | pathogenic | -4.01 | Highly Destabilizing | 0.726 | D | 0.879 | deleterious | None | None | None | None | N |
F/E | 0.9975 | likely_pathogenic | 0.9977 | pathogenic | -3.79 | Highly Destabilizing | 0.726 | D | 0.861 | deleterious | None | None | None | None | N |
F/G | 0.9909 | likely_pathogenic | 0.9918 | pathogenic | -3.702 | Highly Destabilizing | 0.726 | D | 0.83 | deleterious | None | None | None | None | N |
F/H | 0.9326 | likely_pathogenic | 0.9367 | pathogenic | -2.469 | Highly Destabilizing | 0.567 | D | 0.77 | deleterious | None | None | None | None | N |
F/I | 0.7515 | likely_pathogenic | 0.7974 | pathogenic | -1.838 | Destabilizing | 0.22 | N | 0.723 | prob.delet. | N | 0.482649411 | None | None | N |
F/K | 0.9964 | likely_pathogenic | 0.9968 | pathogenic | -2.486 | Highly Destabilizing | 0.567 | D | 0.867 | deleterious | None | None | None | None | N |
F/L | 0.9733 | likely_pathogenic | 0.9807 | pathogenic | -1.838 | Destabilizing | 0.055 | N | 0.689 | prob.neutral | N | 0.482395922 | None | None | N |
F/M | 0.9064 | likely_pathogenic | 0.9222 | pathogenic | -1.527 | Destabilizing | 0.726 | D | 0.745 | deleterious | None | None | None | None | N |
F/N | 0.9784 | likely_pathogenic | 0.9812 | pathogenic | -3.088 | Highly Destabilizing | 0.726 | D | 0.883 | deleterious | None | None | None | None | N |
F/P | 0.9996 | likely_pathogenic | 0.9997 | pathogenic | -2.335 | Highly Destabilizing | 0.89 | D | 0.891 | deleterious | None | None | None | None | N |
F/Q | 0.9922 | likely_pathogenic | 0.9931 | pathogenic | -3.004 | Highly Destabilizing | 0.726 | D | 0.886 | deleterious | None | None | None | None | N |
F/R | 0.9896 | likely_pathogenic | 0.9906 | pathogenic | -2.049 | Highly Destabilizing | 0.567 | D | 0.885 | deleterious | None | None | None | None | N |
F/S | 0.9666 | likely_pathogenic | 0.9708 | pathogenic | -3.565 | Highly Destabilizing | 0.497 | N | 0.807 | deleterious | N | 0.482649411 | None | None | N |
F/T | 0.9776 | likely_pathogenic | 0.9803 | pathogenic | -3.237 | Highly Destabilizing | 0.567 | D | 0.798 | deleterious | None | None | None | None | N |
F/V | 0.783 | likely_pathogenic | 0.8221 | pathogenic | -2.335 | Highly Destabilizing | 0.22 | N | 0.745 | deleterious | N | 0.471293106 | None | None | N |
F/W | 0.662 | likely_pathogenic | 0.6592 | pathogenic | -0.86 | Destabilizing | 0.726 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/Y | 0.1188 | likely_benign | 0.108 | benign | -1.354 | Destabilizing | None | N | 0.319 | neutral | N | 0.285833954 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.