Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30360 | 91303;91304;91305 | chr2:178551822;178551821;178551820 | chr2:179416549;179416548;179416547 |
N2AB | 28719 | 86380;86381;86382 | chr2:178551822;178551821;178551820 | chr2:179416549;179416548;179416547 |
N2A | 27792 | 83599;83600;83601 | chr2:178551822;178551821;178551820 | chr2:179416549;179416548;179416547 |
N2B | 21295 | 64108;64109;64110 | chr2:178551822;178551821;178551820 | chr2:179416549;179416548;179416547 |
Novex-1 | 21420 | 64483;64484;64485 | chr2:178551822;178551821;178551820 | chr2:179416549;179416548;179416547 |
Novex-2 | 21487 | 64684;64685;64686 | chr2:178551822;178551821;178551820 | chr2:179416549;179416548;179416547 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.879 | N | 0.652 | 0.3 | 0.21279746466 | gnomAD-4.0.0 | 1.59114E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85806E-06 | 0 | 0 |
H/Y | rs1033418419 | None | 0.003 | N | 0.506 | 0.092 | 0.18274738541 | gnomAD-4.0.0 | 2.40065E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62501E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.5821 | likely_pathogenic | 0.5334 | ambiguous | -1.883 | Destabilizing | 0.575 | D | 0.625 | neutral | None | None | None | None | N |
H/C | 0.1708 | likely_benign | 0.1611 | benign | -1.09 | Destabilizing | 0.991 | D | 0.761 | deleterious | None | None | None | None | N |
H/D | 0.729 | likely_pathogenic | 0.6711 | pathogenic | -1.824 | Destabilizing | 0.879 | D | 0.678 | prob.neutral | N | 0.472957156 | None | None | N |
H/E | 0.681 | likely_pathogenic | 0.6268 | pathogenic | -1.633 | Destabilizing | 0.733 | D | 0.633 | neutral | None | None | None | None | N |
H/F | 0.1913 | likely_benign | 0.1821 | benign | 0.101 | Stabilizing | 0.704 | D | 0.671 | neutral | None | None | None | None | N |
H/G | 0.7666 | likely_pathogenic | 0.7326 | pathogenic | -2.277 | Highly Destabilizing | 0.733 | D | 0.659 | neutral | None | None | None | None | N |
H/I | 0.2538 | likely_benign | 0.2241 | benign | -0.707 | Destabilizing | 0.826 | D | 0.771 | deleterious | None | None | None | None | N |
H/K | 0.5916 | likely_pathogenic | 0.5323 | ambiguous | -1.402 | Destabilizing | 0.826 | D | 0.675 | neutral | None | None | None | None | N |
H/L | 0.1734 | likely_benign | 0.151 | benign | -0.707 | Destabilizing | 0.338 | N | 0.701 | prob.neutral | N | 0.464607031 | None | None | N |
H/M | 0.4988 | ambiguous | 0.4546 | ambiguous | -0.907 | Destabilizing | 0.991 | D | 0.739 | prob.delet. | None | None | None | None | N |
H/N | 0.2375 | likely_benign | 0.2056 | benign | -1.954 | Destabilizing | 0.674 | D | 0.642 | neutral | N | 0.486617099 | None | None | N |
H/P | 0.9285 | likely_pathogenic | 0.9238 | pathogenic | -1.091 | Destabilizing | 0.957 | D | 0.745 | deleterious | N | 0.490611902 | None | None | N |
H/Q | 0.3634 | ambiguous | 0.3197 | benign | -1.512 | Destabilizing | 0.879 | D | 0.663 | neutral | N | 0.482307358 | None | None | N |
H/R | 0.2434 | likely_benign | 0.2169 | benign | -1.686 | Destabilizing | 0.879 | D | 0.652 | neutral | N | 0.475437314 | None | None | N |
H/S | 0.4332 | ambiguous | 0.389 | ambiguous | -2.066 | Highly Destabilizing | 0.575 | D | 0.657 | neutral | None | None | None | None | N |
H/T | 0.4125 | ambiguous | 0.3815 | ambiguous | -1.769 | Destabilizing | 0.906 | D | 0.677 | prob.neutral | None | None | None | None | N |
H/V | 0.2659 | likely_benign | 0.2393 | benign | -1.091 | Destabilizing | 0.826 | D | 0.723 | prob.delet. | None | None | None | None | N |
H/W | 0.2636 | likely_benign | 0.2631 | benign | 0.587 | Stabilizing | 0.973 | D | 0.737 | prob.delet. | None | None | None | None | N |
H/Y | 0.0798 | likely_benign | 0.0766 | benign | 0.359 | Stabilizing | 0.003 | N | 0.506 | neutral | N | 0.450120369 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.