Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30363 | 91312;91313;91314 | chr2:178551813;178551812;178551811 | chr2:179416540;179416539;179416538 |
N2AB | 28722 | 86389;86390;86391 | chr2:178551813;178551812;178551811 | chr2:179416540;179416539;179416538 |
N2A | 27795 | 83608;83609;83610 | chr2:178551813;178551812;178551811 | chr2:179416540;179416539;179416538 |
N2B | 21298 | 64117;64118;64119 | chr2:178551813;178551812;178551811 | chr2:179416540;179416539;179416538 |
Novex-1 | 21423 | 64492;64493;64494 | chr2:178551813;178551812;178551811 | chr2:179416540;179416539;179416538 |
Novex-2 | 21490 | 64693;64694;64695 | chr2:178551813;178551812;178551811 | chr2:179416540;179416539;179416538 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs762103106 | None | 1.0 | N | 0.829 | 0.39 | 0.306053231325 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/N | rs762103106 | None | 1.0 | N | 0.829 | 0.39 | 0.306053231325 | gnomAD-4.0.0 | 6.5741E-06 | None | None | None | None | N | None | 2.41324E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.831 | likely_pathogenic | 0.8653 | pathogenic | -1.455 | Destabilizing | 0.999 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/C | 0.6665 | likely_pathogenic | 0.6935 | pathogenic | -1.593 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
K/D | 0.9871 | likely_pathogenic | 0.9908 | pathogenic | -2.437 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/E | 0.7332 | likely_pathogenic | 0.7545 | pathogenic | -2.111 | Highly Destabilizing | 0.999 | D | 0.74 | deleterious | N | 0.491955028 | None | None | N |
K/F | 0.8635 | likely_pathogenic | 0.8942 | pathogenic | -0.581 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
K/G | 0.8903 | likely_pathogenic | 0.9147 | pathogenic | -1.941 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/H | 0.5376 | ambiguous | 0.5904 | pathogenic | -1.707 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
K/I | 0.6606 | likely_pathogenic | 0.7074 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
K/L | 0.5978 | likely_pathogenic | 0.6647 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
K/M | 0.351 | ambiguous | 0.3544 | ambiguous | -0.499 | Destabilizing | 1.0 | D | 0.777 | deleterious | N | 0.498663677 | None | None | N |
K/N | 0.9251 | likely_pathogenic | 0.9402 | pathogenic | -2.175 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.483561237 | None | None | N |
K/P | 0.9976 | likely_pathogenic | 0.9987 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | N |
K/Q | 0.2404 | likely_benign | 0.2415 | benign | -1.723 | Destabilizing | 1.0 | D | 0.833 | deleterious | D | 0.523887408 | None | None | N |
K/R | 0.0802 | likely_benign | 0.0908 | benign | -1.17 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | N | 0.438076578 | None | None | N |
K/S | 0.8815 | likely_pathogenic | 0.901 | pathogenic | -2.587 | Highly Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
K/T | 0.6718 | likely_pathogenic | 0.7218 | pathogenic | -2.01 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | N | 0.465341624 | None | None | N |
K/V | 0.5959 | likely_pathogenic | 0.6499 | pathogenic | -0.503 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
K/W | 0.7998 | likely_pathogenic | 0.847 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
K/Y | 0.6739 | likely_pathogenic | 0.7185 | pathogenic | -0.403 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.