Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30364 | 91315;91316;91317 | chr2:178551810;178551809;178551808 | chr2:179416537;179416536;179416535 |
N2AB | 28723 | 86392;86393;86394 | chr2:178551810;178551809;178551808 | chr2:179416537;179416536;179416535 |
N2A | 27796 | 83611;83612;83613 | chr2:178551810;178551809;178551808 | chr2:179416537;179416536;179416535 |
N2B | 21299 | 64120;64121;64122 | chr2:178551810;178551809;178551808 | chr2:179416537;179416536;179416535 |
Novex-1 | 21424 | 64495;64496;64497 | chr2:178551810;178551809;178551808 | chr2:179416537;179416536;179416535 |
Novex-2 | 21491 | 64696;64697;64698 | chr2:178551810;178551809;178551808 | chr2:179416537;179416536;179416535 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1395941923 | -1.822 | 1.0 | N | 0.742 | 0.434 | 0.243972157842 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
K/N | rs1395941923 | -1.822 | 1.0 | N | 0.742 | 0.434 | 0.243972157842 | gnomAD-4.0.0 | 4.10514E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39667E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9811 | likely_pathogenic | 0.9859 | pathogenic | -1.631 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
K/C | 0.9652 | likely_pathogenic | 0.9773 | pathogenic | -1.384 | Destabilizing | 1.0 | D | 0.908 | deleterious | None | None | None | None | N |
K/D | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -1.86 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
K/E | 0.9756 | likely_pathogenic | 0.9846 | pathogenic | -1.559 | Destabilizing | 0.999 | D | 0.541 | neutral | N | 0.502070339 | None | None | N |
K/F | 0.9964 | likely_pathogenic | 0.9976 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
K/G | 0.9869 | likely_pathogenic | 0.9908 | pathogenic | -2.084 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/H | 0.9294 | likely_pathogenic | 0.9426 | pathogenic | -2.02 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
K/I | 0.9825 | likely_pathogenic | 0.9875 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.93 | deleterious | N | 0.508871195 | None | None | N |
K/L | 0.9497 | likely_pathogenic | 0.9575 | pathogenic | -0.332 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/M | 0.8661 | likely_pathogenic | 0.8985 | pathogenic | -0.739 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
K/N | 0.9922 | likely_pathogenic | 0.9948 | pathogenic | -1.644 | Destabilizing | 1.0 | D | 0.742 | deleterious | N | 0.49076694 | None | None | N |
K/P | 0.9994 | likely_pathogenic | 0.9996 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
K/Q | 0.7611 | likely_pathogenic | 0.8274 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | N | 0.521943181 | None | None | N |
K/R | 0.1609 | likely_benign | 0.1928 | benign | -0.947 | Destabilizing | 0.999 | D | 0.549 | neutral | N | 0.458123776 | None | None | N |
K/S | 0.9925 | likely_pathogenic | 0.9951 | pathogenic | -2.148 | Highly Destabilizing | 0.999 | D | 0.578 | neutral | None | None | None | None | N |
K/T | 0.9771 | likely_pathogenic | 0.9847 | pathogenic | -1.605 | Destabilizing | 1.0 | D | 0.805 | deleterious | N | 0.494628054 | None | None | N |
K/V | 0.9697 | likely_pathogenic | 0.9787 | pathogenic | -0.748 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | N |
K/W | 0.9939 | likely_pathogenic | 0.9957 | pathogenic | -0.93 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | N |
K/Y | 0.9813 | likely_pathogenic | 0.9853 | pathogenic | -0.592 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.