Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30373 | 91342;91343;91344 | chr2:178551783;178551782;178551781 | chr2:179416510;179416509;179416508 |
N2AB | 28732 | 86419;86420;86421 | chr2:178551783;178551782;178551781 | chr2:179416510;179416509;179416508 |
N2A | 27805 | 83638;83639;83640 | chr2:178551783;178551782;178551781 | chr2:179416510;179416509;179416508 |
N2B | 21308 | 64147;64148;64149 | chr2:178551783;178551782;178551781 | chr2:179416510;179416509;179416508 |
Novex-1 | 21433 | 64522;64523;64524 | chr2:178551783;178551782;178551781 | chr2:179416510;179416509;179416508 |
Novex-2 | 21500 | 64723;64724;64725 | chr2:178551783;178551782;178551781 | chr2:179416510;179416509;179416508 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.468 | N | 0.708 | 0.147 | 0.181679512989 | gnomAD-4.0.0 | 1.59121E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.568 | likely_pathogenic | 0.5582 | ambiguous | -0.344 | Destabilizing | 0.399 | N | 0.596 | neutral | None | None | None | None | N |
K/C | 0.7276 | likely_pathogenic | 0.7387 | pathogenic | -0.393 | Destabilizing | 0.982 | D | 0.707 | prob.neutral | None | None | None | None | N |
K/D | 0.8445 | likely_pathogenic | 0.839 | pathogenic | -0.144 | Destabilizing | 0.7 | D | 0.764 | deleterious | None | None | None | None | N |
K/E | 0.4389 | ambiguous | 0.4281 | ambiguous | -0.062 | Destabilizing | 0.201 | N | 0.553 | neutral | N | 0.480515059 | None | None | N |
K/F | 0.874 | likely_pathogenic | 0.8747 | pathogenic | -0.098 | Destabilizing | 0.947 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/G | 0.6877 | likely_pathogenic | 0.6968 | pathogenic | -0.687 | Destabilizing | 0.7 | D | 0.665 | neutral | None | None | None | None | N |
K/H | 0.3965 | ambiguous | 0.4129 | ambiguous | -1.079 | Destabilizing | 0.947 | D | 0.754 | deleterious | None | None | None | None | N |
K/I | 0.5002 | ambiguous | 0.4993 | ambiguous | 0.529 | Stabilizing | 0.781 | D | 0.73 | prob.delet. | N | 0.510688825 | None | None | N |
K/L | 0.4585 | ambiguous | 0.4604 | ambiguous | 0.529 | Stabilizing | 0.7 | D | 0.665 | neutral | None | None | None | None | N |
K/M | 0.3498 | ambiguous | 0.3463 | ambiguous | 0.387 | Stabilizing | 0.982 | D | 0.746 | deleterious | None | None | None | None | N |
K/N | 0.6826 | likely_pathogenic | 0.6734 | pathogenic | -0.329 | Destabilizing | 0.638 | D | 0.709 | prob.delet. | N | 0.513689058 | None | None | N |
K/P | 0.6722 | likely_pathogenic | 0.6518 | pathogenic | 0.269 | Stabilizing | 0.826 | D | 0.77 | deleterious | None | None | None | None | N |
K/Q | 0.2106 | likely_benign | 0.209 | benign | -0.429 | Destabilizing | 0.468 | N | 0.708 | prob.delet. | N | 0.499605039 | None | None | N |
K/R | 0.0704 | likely_benign | 0.073 | benign | -0.586 | Destabilizing | 0.002 | N | 0.301 | neutral | N | 0.420682896 | None | None | N |
K/S | 0.7109 | likely_pathogenic | 0.7108 | pathogenic | -0.902 | Destabilizing | 0.399 | N | 0.631 | neutral | None | None | None | None | N |
K/T | 0.3593 | ambiguous | 0.3625 | ambiguous | -0.63 | Destabilizing | 0.638 | D | 0.745 | deleterious | N | 0.473861233 | None | None | N |
K/V | 0.4661 | ambiguous | 0.4757 | ambiguous | 0.269 | Stabilizing | 0.7 | D | 0.728 | prob.delet. | None | None | None | None | N |
K/W | 0.7544 | likely_pathogenic | 0.788 | pathogenic | -0.014 | Destabilizing | 0.982 | D | 0.711 | prob.delet. | None | None | None | None | N |
K/Y | 0.7298 | likely_pathogenic | 0.7362 | pathogenic | 0.276 | Stabilizing | 0.826 | D | 0.724 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.