Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30374 | 91345;91346;91347 | chr2:178551780;178551779;178551778 | chr2:179416507;179416506;179416505 |
N2AB | 28733 | 86422;86423;86424 | chr2:178551780;178551779;178551778 | chr2:179416507;179416506;179416505 |
N2A | 27806 | 83641;83642;83643 | chr2:178551780;178551779;178551778 | chr2:179416507;179416506;179416505 |
N2B | 21309 | 64150;64151;64152 | chr2:178551780;178551779;178551778 | chr2:179416507;179416506;179416505 |
Novex-1 | 21434 | 64525;64526;64527 | chr2:178551780;178551779;178551778 | chr2:179416507;179416506;179416505 |
Novex-2 | 21501 | 64726;64727;64728 | chr2:178551780;178551779;178551778 | chr2:179416507;179416506;179416505 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.001 | N | 0.371 | 0.075 | 0.260735089382 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2063 | likely_benign | 0.2189 | benign | -1.499 | Destabilizing | 0.001 | N | 0.391 | neutral | N | 0.429169093 | None | None | N |
V/C | 0.6604 | likely_pathogenic | 0.6773 | pathogenic | -1.0 | Destabilizing | 0.909 | D | 0.682 | prob.neutral | None | None | None | None | N |
V/D | 0.7192 | likely_pathogenic | 0.7573 | pathogenic | -1.292 | Destabilizing | 0.667 | D | 0.761 | deleterious | N | 0.492462007 | None | None | N |
V/E | 0.5912 | likely_pathogenic | 0.6464 | pathogenic | -1.184 | Destabilizing | 0.567 | D | 0.703 | prob.neutral | None | None | None | None | N |
V/F | 0.2693 | likely_benign | 0.3218 | benign | -0.965 | Destabilizing | 0.331 | N | 0.668 | neutral | N | 0.464581155 | None | None | N |
V/G | 0.3746 | ambiguous | 0.4165 | ambiguous | -1.927 | Destabilizing | 0.331 | N | 0.668 | neutral | N | 0.484321706 | None | None | N |
V/H | 0.8313 | likely_pathogenic | 0.8745 | pathogenic | -1.498 | Destabilizing | 0.968 | D | 0.761 | deleterious | None | None | None | None | N |
V/I | 0.0641 | likely_benign | 0.067 | benign | -0.379 | Destabilizing | 0.001 | N | 0.371 | neutral | N | 0.48719589 | None | None | N |
V/K | 0.8116 | likely_pathogenic | 0.8536 | pathogenic | -1.165 | Destabilizing | 0.567 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/L | 0.1426 | likely_benign | 0.1611 | benign | -0.379 | Destabilizing | 0.001 | N | 0.278 | neutral | N | 0.464223029 | None | None | N |
V/M | 0.1388 | likely_benign | 0.1549 | benign | -0.335 | Destabilizing | 0.567 | D | 0.591 | neutral | None | None | None | None | N |
V/N | 0.513 | ambiguous | 0.5767 | pathogenic | -1.203 | Destabilizing | 0.726 | D | 0.769 | deleterious | None | None | None | None | N |
V/P | 0.8791 | likely_pathogenic | 0.9063 | pathogenic | -0.719 | Destabilizing | 0.726 | D | 0.726 | prob.delet. | None | None | None | None | N |
V/Q | 0.6399 | likely_pathogenic | 0.7026 | pathogenic | -1.187 | Destabilizing | 0.726 | D | 0.741 | deleterious | None | None | None | None | N |
V/R | 0.7743 | likely_pathogenic | 0.8241 | pathogenic | -0.873 | Destabilizing | 0.567 | D | 0.767 | deleterious | None | None | None | None | N |
V/S | 0.35 | ambiguous | 0.3888 | ambiguous | -1.827 | Destabilizing | 0.396 | N | 0.647 | neutral | None | None | None | None | N |
V/T | 0.2907 | likely_benign | 0.3216 | benign | -1.58 | Destabilizing | 0.272 | N | 0.514 | neutral | None | None | None | None | N |
V/W | 0.8879 | likely_pathogenic | 0.9203 | pathogenic | -1.299 | Destabilizing | 0.968 | D | 0.731 | prob.delet. | None | None | None | None | N |
V/Y | 0.6776 | likely_pathogenic | 0.7375 | pathogenic | -0.91 | Destabilizing | 0.726 | D | 0.685 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.