Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30379 | 91360;91361;91362 | chr2:178551765;178551764;178551763 | chr2:179416492;179416491;179416490 |
N2AB | 28738 | 86437;86438;86439 | chr2:178551765;178551764;178551763 | chr2:179416492;179416491;179416490 |
N2A | 27811 | 83656;83657;83658 | chr2:178551765;178551764;178551763 | chr2:179416492;179416491;179416490 |
N2B | 21314 | 64165;64166;64167 | chr2:178551765;178551764;178551763 | chr2:179416492;179416491;179416490 |
Novex-1 | 21439 | 64540;64541;64542 | chr2:178551765;178551764;178551763 | chr2:179416492;179416491;179416490 |
Novex-2 | 21506 | 64741;64742;64743 | chr2:178551765;178551764;178551763 | chr2:179416492;179416491;179416490 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs746319162 | -1.2 | 0.026 | N | 0.243 | 0.078 | 0.265010934533 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/V | rs746319162 | -1.2 | 0.026 | N | 0.243 | 0.078 | 0.265010934533 | gnomAD-4.0.0 | 4.7735E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71621E-06 | 1.43279E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4733 | ambiguous | 0.5368 | ambiguous | -2.03 | Highly Destabilizing | 0.851 | D | 0.557 | neutral | None | None | None | None | N |
I/C | 0.6592 | likely_pathogenic | 0.7169 | pathogenic | -1.133 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/D | 0.9465 | likely_pathogenic | 0.9577 | pathogenic | -2.059 | Highly Destabilizing | 0.996 | D | 0.796 | deleterious | None | None | None | None | N |
I/E | 0.9085 | likely_pathogenic | 0.9248 | pathogenic | -1.821 | Destabilizing | 0.988 | D | 0.771 | deleterious | None | None | None | None | N |
I/F | 0.3159 | likely_benign | 0.3801 | ambiguous | -1.171 | Destabilizing | 0.968 | D | 0.687 | prob.neutral | D | 0.523020617 | None | None | N |
I/G | 0.8246 | likely_pathogenic | 0.8566 | pathogenic | -2.58 | Highly Destabilizing | 0.988 | D | 0.767 | deleterious | None | None | None | None | N |
I/H | 0.8263 | likely_pathogenic | 0.8592 | pathogenic | -2.14 | Highly Destabilizing | 0.999 | D | 0.782 | deleterious | None | None | None | None | N |
I/K | 0.8253 | likely_pathogenic | 0.8516 | pathogenic | -1.222 | Destabilizing | 0.988 | D | 0.772 | deleterious | None | None | None | None | N |
I/L | 0.1188 | likely_benign | 0.1309 | benign | -0.445 | Destabilizing | 0.011 | N | 0.267 | neutral | N | 0.462510876 | None | None | N |
I/M | 0.1762 | likely_benign | 0.1974 | benign | -0.389 | Destabilizing | 0.968 | D | 0.697 | prob.neutral | N | 0.48706673 | None | None | N |
I/N | 0.6248 | likely_pathogenic | 0.6704 | pathogenic | -1.548 | Destabilizing | 0.995 | D | 0.806 | deleterious | N | 0.461868449 | None | None | N |
I/P | 0.9183 | likely_pathogenic | 0.9428 | pathogenic | -0.953 | Destabilizing | 0.996 | D | 0.799 | deleterious | None | None | None | None | N |
I/Q | 0.7885 | likely_pathogenic | 0.8235 | pathogenic | -1.369 | Destabilizing | 0.996 | D | 0.793 | deleterious | None | None | None | None | N |
I/R | 0.7474 | likely_pathogenic | 0.7882 | pathogenic | -1.154 | Destabilizing | 0.996 | D | 0.803 | deleterious | None | None | None | None | N |
I/S | 0.5512 | ambiguous | 0.6062 | pathogenic | -2.264 | Highly Destabilizing | 0.984 | D | 0.696 | prob.neutral | N | 0.5025652 | None | None | N |
I/T | 0.4822 | ambiguous | 0.5272 | ambiguous | -1.872 | Destabilizing | 0.896 | D | 0.661 | neutral | N | 0.488691826 | None | None | N |
I/V | 0.0645 | likely_benign | 0.065 | benign | -0.953 | Destabilizing | 0.026 | N | 0.243 | neutral | N | 0.435977635 | None | None | N |
I/W | 0.9464 | likely_pathogenic | 0.9592 | pathogenic | -1.568 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
I/Y | 0.7925 | likely_pathogenic | 0.8293 | pathogenic | -1.2 | Destabilizing | 0.996 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.