Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30386 | 91381;91382;91383 | chr2:178551744;178551743;178551742 | chr2:179416471;179416470;179416469 |
N2AB | 28745 | 86458;86459;86460 | chr2:178551744;178551743;178551742 | chr2:179416471;179416470;179416469 |
N2A | 27818 | 83677;83678;83679 | chr2:178551744;178551743;178551742 | chr2:179416471;179416470;179416469 |
N2B | 21321 | 64186;64187;64188 | chr2:178551744;178551743;178551742 | chr2:179416471;179416470;179416469 |
Novex-1 | 21446 | 64561;64562;64563 | chr2:178551744;178551743;178551742 | chr2:179416471;179416470;179416469 |
Novex-2 | 21513 | 64762;64763;64764 | chr2:178551744;178551743;178551742 | chr2:179416471;179416470;179416469 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/G | None | None | 0.211 | N | 0.643 | 0.136 | 0.270447802918 | gnomAD-4.0.0 | 1.59127E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/T | None | None | 0.027 | N | 0.583 | 0.076 | 0.29385284311 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3136 | likely_benign | 0.3274 | benign | -0.842 | Destabilizing | 0.555 | D | 0.668 | neutral | None | None | None | None | N |
A/D | 0.8272 | likely_pathogenic | 0.859 | pathogenic | -1.268 | Destabilizing | 0.484 | N | 0.781 | deleterious | N | 0.456046263 | None | None | N |
A/E | 0.7121 | likely_pathogenic | 0.7639 | pathogenic | -1.066 | Destabilizing | 0.262 | N | 0.729 | prob.delet. | None | None | None | None | N |
A/F | 0.3833 | ambiguous | 0.4648 | ambiguous | -0.48 | Destabilizing | 0.38 | N | 0.777 | deleterious | None | None | None | None | N |
A/G | 0.2546 | likely_benign | 0.2985 | benign | -1.183 | Destabilizing | 0.211 | N | 0.643 | neutral | N | 0.515651927 | None | None | N |
A/H | 0.8212 | likely_pathogenic | 0.8641 | pathogenic | -1.675 | Destabilizing | 0.935 | D | 0.817 | deleterious | None | None | None | None | N |
A/I | 0.0944 | likely_benign | 0.1071 | benign | 0.646 | Stabilizing | None | N | 0.46 | neutral | None | None | None | None | N |
A/K | 0.8818 | likely_pathogenic | 0.9192 | pathogenic | -0.745 | Destabilizing | 0.262 | N | 0.731 | prob.delet. | None | None | None | None | N |
A/L | 0.1394 | likely_benign | 0.1615 | benign | 0.646 | Stabilizing | 0.005 | N | 0.573 | neutral | None | None | None | None | N |
A/M | 0.1703 | likely_benign | 0.21 | benign | 0.303 | Stabilizing | 0.38 | N | 0.79 | deleterious | None | None | None | None | N |
A/N | 0.572 | likely_pathogenic | 0.6563 | pathogenic | -1.001 | Destabilizing | 0.791 | D | 0.803 | deleterious | None | None | None | None | N |
A/P | 0.7127 | likely_pathogenic | 0.7584 | pathogenic | 0.251 | Stabilizing | 0.741 | D | 0.775 | deleterious | N | 0.515825286 | None | None | N |
A/Q | 0.7097 | likely_pathogenic | 0.7695 | pathogenic | -0.747 | Destabilizing | 0.791 | D | 0.791 | deleterious | None | None | None | None | N |
A/R | 0.8567 | likely_pathogenic | 0.896 | pathogenic | -1.027 | Destabilizing | 0.555 | D | 0.796 | deleterious | None | None | None | None | N |
A/S | 0.1413 | likely_benign | 0.1552 | benign | -1.525 | Destabilizing | 0.117 | N | 0.605 | neutral | N | 0.469514206 | None | None | N |
A/T | 0.1003 | likely_benign | 0.1103 | benign | -1.159 | Destabilizing | 0.027 | N | 0.583 | neutral | N | 0.469687564 | None | None | N |
A/V | 0.0552 | likely_benign | 0.0577 | benign | 0.251 | Stabilizing | None | N | 0.21 | neutral | N | 0.324380139 | None | None | N |
A/W | 0.8908 | likely_pathogenic | 0.9237 | pathogenic | -1.185 | Destabilizing | 0.935 | D | 0.803 | deleterious | None | None | None | None | N |
A/Y | 0.6668 | likely_pathogenic | 0.7365 | pathogenic | -0.543 | Destabilizing | 0.555 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.