Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30393 | 91402;91403;91404 | chr2:178551723;178551722;178551721 | chr2:179416450;179416449;179416448 |
N2AB | 28752 | 86479;86480;86481 | chr2:178551723;178551722;178551721 | chr2:179416450;179416449;179416448 |
N2A | 27825 | 83698;83699;83700 | chr2:178551723;178551722;178551721 | chr2:179416450;179416449;179416448 |
N2B | 21328 | 64207;64208;64209 | chr2:178551723;178551722;178551721 | chr2:179416450;179416449;179416448 |
Novex-1 | 21453 | 64582;64583;64584 | chr2:178551723;178551722;178551721 | chr2:179416450;179416449;179416448 |
Novex-2 | 21520 | 64783;64784;64785 | chr2:178551723;178551722;178551721 | chr2:179416450;179416449;179416448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.681 | 0.63 | 0.838516671336 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.6505 | likely_pathogenic | 0.5884 | pathogenic | -1.815 | Destabilizing | 0.999 | D | 0.638 | neutral | None | None | None | None | I |
L/C | 0.7554 | likely_pathogenic | 0.7164 | pathogenic | -0.914 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
L/D | 0.9708 | likely_pathogenic | 0.9624 | pathogenic | -1.323 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
L/E | 0.8446 | likely_pathogenic | 0.8149 | pathogenic | -1.274 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
L/F | 0.429 | ambiguous | 0.406 | ambiguous | -1.201 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | I |
L/G | 0.8859 | likely_pathogenic | 0.8476 | pathogenic | -2.183 | Highly Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
L/H | 0.6707 | likely_pathogenic | 0.6162 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | I |
L/I | 0.1752 | likely_benign | 0.1662 | benign | -0.851 | Destabilizing | 0.999 | D | 0.445 | neutral | None | None | None | None | I |
L/K | 0.7502 | likely_pathogenic | 0.6701 | pathogenic | -1.223 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | I |
L/M | 0.1618 | likely_benign | 0.157 | benign | -0.571 | Destabilizing | 1.0 | D | 0.671 | neutral | N | 0.499431681 | None | None | I |
L/N | 0.7756 | likely_pathogenic | 0.7046 | pathogenic | -1.124 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | I |
L/P | 0.9867 | likely_pathogenic | 0.988 | pathogenic | -1.143 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.487484803 | None | None | I |
L/Q | 0.4807 | ambiguous | 0.4235 | ambiguous | -1.25 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | N | 0.486059739 | None | None | I |
L/R | 0.6273 | likely_pathogenic | 0.5597 | ambiguous | -0.64 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | N | 0.472821083 | None | None | I |
L/S | 0.753 | likely_pathogenic | 0.6972 | pathogenic | -1.759 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
L/T | 0.5759 | likely_pathogenic | 0.5312 | ambiguous | -1.594 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | I |
L/V | 0.2182 | likely_benign | 0.2046 | benign | -1.143 | Destabilizing | 0.999 | D | 0.411 | neutral | N | 0.464068314 | None | None | I |
L/W | 0.678 | likely_pathogenic | 0.6369 | pathogenic | -1.352 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | I |
L/Y | 0.7493 | likely_pathogenic | 0.6949 | pathogenic | -1.104 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.