Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30407 | 91444;91445;91446 | chr2:178551681;178551680;178551679 | chr2:179416408;179416407;179416406 |
N2AB | 28766 | 86521;86522;86523 | chr2:178551681;178551680;178551679 | chr2:179416408;179416407;179416406 |
N2A | 27839 | 83740;83741;83742 | chr2:178551681;178551680;178551679 | chr2:179416408;179416407;179416406 |
N2B | 21342 | 64249;64250;64251 | chr2:178551681;178551680;178551679 | chr2:179416408;179416407;179416406 |
Novex-1 | 21467 | 64624;64625;64626 | chr2:178551681;178551680;178551679 | chr2:179416408;179416407;179416406 |
Novex-2 | 21534 | 64825;64826;64827 | chr2:178551681;178551680;178551679 | chr2:179416408;179416407;179416406 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs778086508 | -1.341 | 1.0 | N | 0.831 | 0.435 | 0.80318517577 | gnomAD-2.1.1 | 8.07E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.59E-05 | None | 0 | 0 | 0 |
L/P | rs778086508 | -1.341 | 1.0 | N | 0.831 | 0.435 | 0.80318517577 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/P | rs778086508 | -1.341 | 1.0 | N | 0.831 | 0.435 | 0.80318517577 | gnomAD-4.0.0 | 1.02815E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.40269E-06 | 9.41772E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1876 | likely_benign | 0.2092 | benign | -1.861 | Destabilizing | 0.994 | D | 0.721 | prob.delet. | None | None | None | None | I |
L/C | 0.3212 | likely_benign | 0.3522 | ambiguous | -0.956 | Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | I |
L/D | 0.6198 | likely_pathogenic | 0.6508 | pathogenic | -0.877 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
L/E | 0.3324 | likely_benign | 0.3499 | ambiguous | -0.848 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
L/F | 0.0935 | likely_benign | 0.1026 | benign | -1.276 | Destabilizing | 0.998 | D | 0.832 | deleterious | None | None | None | None | I |
L/G | 0.4461 | ambiguous | 0.4757 | ambiguous | -2.215 | Highly Destabilizing | 0.999 | D | 0.819 | deleterious | None | None | None | None | I |
L/H | 0.1928 | likely_benign | 0.2197 | benign | -1.264 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
L/I | 0.0671 | likely_benign | 0.0684 | benign | -0.944 | Destabilizing | 0.984 | D | 0.641 | neutral | N | 0.419125458 | None | None | I |
L/K | 0.1892 | likely_benign | 0.21 | benign | -1.061 | Destabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | I |
L/M | 0.0901 | likely_benign | 0.092 | benign | -0.661 | Destabilizing | 0.971 | D | 0.547 | neutral | None | None | None | None | I |
L/N | 0.285 | likely_benign | 0.3136 | benign | -0.829 | Destabilizing | 1.0 | D | 0.831 | deleterious | None | None | None | None | I |
L/P | 0.2078 | likely_benign | 0.2473 | benign | -1.22 | Destabilizing | 1.0 | D | 0.831 | deleterious | N | 0.468572843 | None | None | I |
L/Q | 0.132 | likely_benign | 0.1512 | benign | -0.981 | Destabilizing | 0.999 | D | 0.84 | deleterious | N | 0.455411545 | None | None | I |
L/R | 0.1614 | likely_benign | 0.184 | benign | -0.474 | Destabilizing | 0.999 | D | 0.843 | deleterious | N | 0.467514051 | None | None | I |
L/S | 0.2116 | likely_benign | 0.2389 | benign | -1.557 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | I |
L/T | 0.149 | likely_benign | 0.1691 | benign | -1.403 | Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | I |
L/V | 0.0719 | likely_benign | 0.0763 | benign | -1.22 | Destabilizing | 0.984 | D | 0.679 | prob.neutral | N | 0.412756846 | None | None | I |
L/W | 0.2202 | likely_benign | 0.2309 | benign | -1.301 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
L/Y | 0.2262 | likely_benign | 0.2444 | benign | -1.109 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.