Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC3040791444;91445;91446 chr2:178551681;178551680;178551679chr2:179416408;179416407;179416406
N2AB2876686521;86522;86523 chr2:178551681;178551680;178551679chr2:179416408;179416407;179416406
N2A2783983740;83741;83742 chr2:178551681;178551680;178551679chr2:179416408;179416407;179416406
N2B2134264249;64250;64251 chr2:178551681;178551680;178551679chr2:179416408;179416407;179416406
Novex-12146764624;64625;64626 chr2:178551681;178551680;178551679chr2:179416408;179416407;179416406
Novex-22153464825;64826;64827 chr2:178551681;178551680;178551679chr2:179416408;179416407;179416406
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: L
  • RefSeq wild type transcript codon: CTA
  • RefSeq wild type template codon: GAT
  • Domain: Fn3-109
  • Domain position: 84
  • Structural Position: 117
  • Q(SASA): 0.3389
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
L/P rs778086508 -1.341 1.0 N 0.831 0.435 0.80318517577 gnomAD-2.1.1 8.07E-06 None None None None I None 0 0 None 0 0 None 6.59E-05 None 0 0 0
L/P rs778086508 -1.341 1.0 N 0.831 0.435 0.80318517577 gnomAD-3.1.2 6.57E-06 None None None None I None 0 0 0 0 0 None 0 0 1.47E-05 0 0
L/P rs778086508 -1.341 1.0 N 0.831 0.435 0.80318517577 gnomAD-4.0.0 1.02815E-05 None None None None I None 0 0 None 0 0 None 0 0 2.40269E-06 9.41772E-05 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
L/A 0.1876 likely_benign 0.2092 benign -1.861 Destabilizing 0.994 D 0.721 prob.delet. None None None None I
L/C 0.3212 likely_benign 0.3522 ambiguous -0.956 Destabilizing 1.0 D 0.816 deleterious None None None None I
L/D 0.6198 likely_pathogenic 0.6508 pathogenic -0.877 Destabilizing 1.0 D 0.83 deleterious None None None None I
L/E 0.3324 likely_benign 0.3499 ambiguous -0.848 Destabilizing 1.0 D 0.827 deleterious None None None None I
L/F 0.0935 likely_benign 0.1026 benign -1.276 Destabilizing 0.998 D 0.832 deleterious None None None None I
L/G 0.4461 ambiguous 0.4757 ambiguous -2.215 Highly Destabilizing 0.999 D 0.819 deleterious None None None None I
L/H 0.1928 likely_benign 0.2197 benign -1.264 Destabilizing 1.0 D 0.837 deleterious None None None None I
L/I 0.0671 likely_benign 0.0684 benign -0.944 Destabilizing 0.984 D 0.641 neutral N 0.419125458 None None I
L/K 0.1892 likely_benign 0.21 benign -1.061 Destabilizing 0.999 D 0.831 deleterious None None None None I
L/M 0.0901 likely_benign 0.092 benign -0.661 Destabilizing 0.971 D 0.547 neutral None None None None I
L/N 0.285 likely_benign 0.3136 benign -0.829 Destabilizing 1.0 D 0.831 deleterious None None None None I
L/P 0.2078 likely_benign 0.2473 benign -1.22 Destabilizing 1.0 D 0.831 deleterious N 0.468572843 None None I
L/Q 0.132 likely_benign 0.1512 benign -0.981 Destabilizing 0.999 D 0.84 deleterious N 0.455411545 None None I
L/R 0.1614 likely_benign 0.184 benign -0.474 Destabilizing 0.999 D 0.843 deleterious N 0.467514051 None None I
L/S 0.2116 likely_benign 0.2389 benign -1.557 Destabilizing 0.999 D 0.825 deleterious None None None None I
L/T 0.149 likely_benign 0.1691 benign -1.403 Destabilizing 0.999 D 0.796 deleterious None None None None I
L/V 0.0719 likely_benign 0.0763 benign -1.22 Destabilizing 0.984 D 0.679 prob.neutral N 0.412756846 None None I
L/W 0.2202 likely_benign 0.2309 benign -1.301 Destabilizing 1.0 D 0.829 deleterious None None None None I
L/Y 0.2262 likely_benign 0.2444 benign -1.109 Destabilizing 1.0 D 0.834 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.