Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30410 | 91453;91454;91455 | chr2:178551672;178551671;178551670 | chr2:179416399;179416398;179416397 |
N2AB | 28769 | 86530;86531;86532 | chr2:178551672;178551671;178551670 | chr2:179416399;179416398;179416397 |
N2A | 27842 | 83749;83750;83751 | chr2:178551672;178551671;178551670 | chr2:179416399;179416398;179416397 |
N2B | 21345 | 64258;64259;64260 | chr2:178551672;178551671;178551670 | chr2:179416399;179416398;179416397 |
Novex-1 | 21470 | 64633;64634;64635 | chr2:178551672;178551671;178551670 | chr2:179416399;179416398;179416397 |
Novex-2 | 21537 | 64834;64835;64836 | chr2:178551672;178551671;178551670 | chr2:179416399;179416398;179416397 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.454 | N | 0.523 | 0.303 | 0.524792858863 | gnomAD-4.0.0 | 1.61041E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.061 | likely_benign | 0.0654 | benign | -1.556 | Destabilizing | 0.012 | N | 0.294 | neutral | N | 0.496564734 | None | None | N |
P/C | 0.2962 | likely_benign | 0.3712 | ambiguous | -0.953 | Destabilizing | 0.993 | D | 0.655 | neutral | None | None | None | None | N |
P/D | 0.8321 | likely_pathogenic | 0.8771 | pathogenic | -1.211 | Destabilizing | 0.974 | D | 0.499 | neutral | None | None | None | None | N |
P/E | 0.5673 | likely_pathogenic | 0.6285 | pathogenic | -1.217 | Destabilizing | 0.842 | D | 0.461 | neutral | None | None | None | None | N |
P/F | 0.4104 | ambiguous | 0.5286 | ambiguous | -1.264 | Destabilizing | 0.974 | D | 0.641 | neutral | None | None | None | None | N |
P/G | 0.3675 | ambiguous | 0.4321 | ambiguous | -1.858 | Destabilizing | 0.728 | D | 0.53 | neutral | None | None | None | None | N |
P/H | 0.3222 | likely_benign | 0.3831 | ambiguous | -1.327 | Destabilizing | 0.997 | D | 0.593 | neutral | N | 0.514009303 | None | None | N |
P/I | 0.2718 | likely_benign | 0.3515 | ambiguous | -0.826 | Destabilizing | 0.728 | D | 0.557 | neutral | None | None | None | None | N |
P/K | 0.5498 | ambiguous | 0.6295 | pathogenic | -1.072 | Destabilizing | 0.842 | D | 0.471 | neutral | None | None | None | None | N |
P/L | 0.1591 | likely_benign | 0.2255 | benign | -0.826 | Destabilizing | 0.454 | N | 0.523 | neutral | N | 0.495598651 | None | None | N |
P/M | 0.2931 | likely_benign | 0.3746 | ambiguous | -0.608 | Destabilizing | 0.974 | D | 0.591 | neutral | None | None | None | None | N |
P/N | 0.5945 | likely_pathogenic | 0.6754 | pathogenic | -0.857 | Destabilizing | 0.974 | D | 0.551 | neutral | None | None | None | None | N |
P/Q | 0.2633 | likely_benign | 0.3099 | benign | -1.06 | Destabilizing | 0.974 | D | 0.479 | neutral | None | None | None | None | N |
P/R | 0.3802 | ambiguous | 0.4615 | ambiguous | -0.555 | Destabilizing | 0.966 | D | 0.554 | neutral | N | 0.496866099 | None | None | N |
P/S | 0.1516 | likely_benign | 0.1778 | benign | -1.415 | Destabilizing | 0.669 | D | 0.45 | neutral | N | 0.482774315 | None | None | N |
P/T | 0.1616 | likely_benign | 0.1984 | benign | -1.316 | Destabilizing | 0.801 | D | 0.466 | neutral | N | 0.501892529 | None | None | N |
P/V | 0.165 | likely_benign | 0.2094 | benign | -1.035 | Destabilizing | 0.007 | N | 0.446 | neutral | None | None | None | None | N |
P/W | 0.6917 | likely_pathogenic | 0.7784 | pathogenic | -1.409 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
P/Y | 0.489 | ambiguous | 0.5945 | pathogenic | -1.121 | Destabilizing | 0.991 | D | 0.642 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.