Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30412 | 91459;91460;91461 | chr2:178551666;178551665;178551664 | chr2:179416393;179416392;179416391 |
N2AB | 28771 | 86536;86537;86538 | chr2:178551666;178551665;178551664 | chr2:179416393;179416392;179416391 |
N2A | 27844 | 83755;83756;83757 | chr2:178551666;178551665;178551664 | chr2:179416393;179416392;179416391 |
N2B | 21347 | 64264;64265;64266 | chr2:178551666;178551665;178551664 | chr2:179416393;179416392;179416391 |
Novex-1 | 21472 | 64639;64640;64641 | chr2:178551666;178551665;178551664 | chr2:179416393;179416392;179416391 |
Novex-2 | 21539 | 64840;64841;64842 | chr2:178551666;178551665;178551664 | chr2:179416393;179416392;179416391 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.799 | N | 0.656 | 0.26 | 0.221734844693 | gnomAD-4.0.0 | 1.6231E-06 | None | None | None | None | I | None | 5.82208E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | None | None | 0.799 | N | 0.559 | 0.252 | 0.232513804876 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1481 | likely_benign | 0.174 | benign | -0.404 | Destabilizing | 0.799 | D | 0.679 | prob.neutral | N | 0.427163364 | None | None | I |
D/C | 0.5878 | likely_pathogenic | 0.6306 | pathogenic | -0.081 | Destabilizing | 0.998 | D | 0.87 | deleterious | None | None | None | None | I |
D/E | 0.0892 | likely_benign | 0.0935 | benign | -0.387 | Destabilizing | 0.002 | N | 0.128 | neutral | N | 0.415444861 | None | None | I |
D/F | 0.4618 | ambiguous | 0.5224 | ambiguous | -0.252 | Destabilizing | 0.991 | D | 0.869 | deleterious | None | None | None | None | I |
D/G | 0.235 | likely_benign | 0.2806 | benign | -0.616 | Destabilizing | 0.799 | D | 0.656 | prob.neutral | N | 0.481517924 | None | None | I |
D/H | 0.2995 | likely_benign | 0.3443 | ambiguous | -0.1 | Destabilizing | 0.966 | D | 0.761 | deleterious | N | 0.508896526 | None | None | I |
D/I | 0.2147 | likely_benign | 0.2619 | benign | 0.113 | Stabilizing | 0.974 | D | 0.868 | deleterious | None | None | None | None | I |
D/K | 0.347 | ambiguous | 0.3926 | ambiguous | 0.197 | Stabilizing | 0.725 | D | 0.627 | neutral | None | None | None | None | I |
D/L | 0.2432 | likely_benign | 0.2795 | benign | 0.113 | Stabilizing | 0.949 | D | 0.72 | deleterious | None | None | None | None | I |
D/M | 0.423 | ambiguous | 0.4698 | ambiguous | 0.277 | Stabilizing | 0.998 | D | 0.842 | deleterious | None | None | None | None | I |
D/N | 0.1183 | likely_benign | 0.1452 | benign | -0.177 | Destabilizing | 0.799 | D | 0.559 | neutral | N | 0.481171207 | None | None | I |
D/P | 0.4431 | ambiguous | 0.4815 | ambiguous | -0.037 | Destabilizing | 0.974 | D | 0.724 | deleterious | None | None | None | None | I |
D/Q | 0.2644 | likely_benign | 0.2946 | benign | -0.137 | Destabilizing | 0.725 | D | 0.62 | neutral | None | None | None | None | I |
D/R | 0.4165 | ambiguous | 0.4628 | ambiguous | 0.402 | Stabilizing | 0.949 | D | 0.737 | deleterious | None | None | None | None | I |
D/S | 0.1259 | likely_benign | 0.146 | benign | -0.285 | Destabilizing | 0.841 | D | 0.549 | neutral | None | None | None | None | I |
D/T | 0.2036 | likely_benign | 0.2454 | benign | -0.116 | Destabilizing | 0.841 | D | 0.713 | prob.delet. | None | None | None | None | I |
D/V | 0.145 | likely_benign | 0.1744 | benign | -0.037 | Destabilizing | 0.966 | D | 0.739 | deleterious | N | 0.483864796 | None | None | I |
D/W | 0.8803 | likely_pathogenic | 0.8923 | pathogenic | -0.079 | Destabilizing | 0.998 | D | 0.862 | deleterious | None | None | None | None | I |
D/Y | 0.22 | likely_benign | 0.2464 | benign | -0.009 | Destabilizing | 0.989 | D | 0.872 | deleterious | N | 0.465858148 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.