Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30422 | 91489;91490;91491 | chr2:178551636;178551635;178551634 | chr2:179416363;179416362;179416361 |
N2AB | 28781 | 86566;86567;86568 | chr2:178551636;178551635;178551634 | chr2:179416363;179416362;179416361 |
N2A | 27854 | 83785;83786;83787 | chr2:178551636;178551635;178551634 | chr2:179416363;179416362;179416361 |
N2B | 21357 | 64294;64295;64296 | chr2:178551636;178551635;178551634 | chr2:179416363;179416362;179416361 |
Novex-1 | 21482 | 64669;64670;64671 | chr2:178551636;178551635;178551634 | chr2:179416363;179416362;179416361 |
Novex-2 | 21549 | 64870;64871;64872 | chr2:178551636;178551635;178551634 | chr2:179416363;179416362;179416361 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | N | 0.849 | 0.49 | 0.710313493133 | gnomAD-4.0.0 | 1.40508E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.79921E-04 | 9.14843E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.205 | likely_benign | 0.1697 | benign | -0.28 | Destabilizing | 0.999 | D | 0.821 | deleterious | N | 0.492806586 | None | None | I |
P/C | 0.8733 | likely_pathogenic | 0.8292 | pathogenic | -0.675 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/D | 0.9269 | likely_pathogenic | 0.89 | pathogenic | -0.319 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
P/E | 0.7897 | likely_pathogenic | 0.7093 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/F | 0.9006 | likely_pathogenic | 0.8525 | pathogenic | -0.652 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
P/G | 0.8072 | likely_pathogenic | 0.7521 | pathogenic | -0.353 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | I |
P/H | 0.6663 | likely_pathogenic | 0.5702 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
P/I | 0.7133 | likely_pathogenic | 0.6166 | pathogenic | -0.241 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
P/K | 0.8191 | likely_pathogenic | 0.7465 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
P/L | 0.3857 | ambiguous | 0.3135 | benign | -0.241 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.481858808 | None | None | I |
P/M | 0.6862 | likely_pathogenic | 0.5999 | pathogenic | -0.445 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
P/N | 0.8401 | likely_pathogenic | 0.765 | pathogenic | -0.076 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
P/Q | 0.5287 | ambiguous | 0.4271 | ambiguous | -0.319 | Destabilizing | 1.0 | D | 0.833 | deleterious | N | 0.497369397 | None | None | I |
P/R | 0.6216 | likely_pathogenic | 0.539 | ambiguous | 0.163 | Stabilizing | 1.0 | D | 0.875 | deleterious | N | 0.491582499 | None | None | I |
P/S | 0.4603 | ambiguous | 0.374 | ambiguous | -0.382 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.514459694 | None | None | I |
P/T | 0.3902 | ambiguous | 0.3072 | benign | -0.415 | Destabilizing | 1.0 | D | 0.847 | deleterious | N | 0.514206204 | None | None | I |
P/V | 0.5036 | ambiguous | 0.4117 | ambiguous | -0.224 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
P/W | 0.9601 | likely_pathogenic | 0.9395 | pathogenic | -0.712 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
P/Y | 0.8991 | likely_pathogenic | 0.8492 | pathogenic | -0.42 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.