Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30438 | 91537;91538;91539 | chr2:178551219;178551218;178551217 | chr2:179415946;179415945;179415944 |
N2AB | 28797 | 86614;86615;86616 | chr2:178551219;178551218;178551217 | chr2:179415946;179415945;179415944 |
N2A | 27870 | 83833;83834;83835 | chr2:178551219;178551218;178551217 | chr2:179415946;179415945;179415944 |
N2B | 21373 | 64342;64343;64344 | chr2:178551219;178551218;178551217 | chr2:179415946;179415945;179415944 |
Novex-1 | 21498 | 64717;64718;64719 | chr2:178551219;178551218;178551217 | chr2:179415946;179415945;179415944 |
Novex-2 | 21565 | 64918;64919;64920 | chr2:178551219;178551218;178551217 | chr2:179415946;179415945;179415944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.835 | N | 0.387 | 0.143 | 0.215869574891 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1535 | likely_benign | 0.1583 | benign | -0.818 | Destabilizing | 0.835 | D | 0.387 | neutral | N | 0.463436382 | None | None | N |
T/C | 0.5153 | ambiguous | 0.4907 | ambiguous | -0.928 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
T/D | 0.6593 | likely_pathogenic | 0.698 | pathogenic | -1.583 | Destabilizing | 0.97 | D | 0.641 | neutral | None | None | None | None | N |
T/E | 0.5574 | ambiguous | 0.5847 | pathogenic | -1.521 | Destabilizing | 0.97 | D | 0.629 | neutral | None | None | None | None | N |
T/F | 0.4858 | ambiguous | 0.479 | ambiguous | -0.962 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
T/G | 0.3367 | likely_benign | 0.3692 | ambiguous | -1.093 | Destabilizing | 0.97 | D | 0.581 | neutral | None | None | None | None | N |
T/H | 0.3928 | ambiguous | 0.4008 | ambiguous | -1.416 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
T/I | 0.646 | likely_pathogenic | 0.6326 | pathogenic | -0.159 | Destabilizing | 0.994 | D | 0.697 | prob.neutral | N | 0.492439235 | None | None | N |
T/K | 0.4822 | ambiguous | 0.5056 | ambiguous | -0.716 | Destabilizing | 0.97 | D | 0.637 | neutral | None | None | None | None | N |
T/L | 0.3082 | likely_benign | 0.3058 | benign | -0.159 | Destabilizing | 0.985 | D | 0.57 | neutral | None | None | None | None | N |
T/M | 0.1261 | likely_benign | 0.1228 | benign | 0.067 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
T/N | 0.1631 | likely_benign | 0.1731 | benign | -1.084 | Destabilizing | 0.961 | D | 0.519 | neutral | N | 0.516308075 | None | None | N |
T/P | 0.9652 | likely_pathogenic | 0.9663 | pathogenic | -0.348 | Destabilizing | 0.994 | D | 0.699 | prob.neutral | N | 0.503795541 | None | None | N |
T/Q | 0.3725 | ambiguous | 0.376 | ambiguous | -1.271 | Destabilizing | 0.996 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/R | 0.4497 | ambiguous | 0.4808 | ambiguous | -0.522 | Destabilizing | 0.996 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/S | 0.1053 | likely_benign | 0.1076 | benign | -1.189 | Destabilizing | 0.287 | N | 0.213 | neutral | N | 0.36501604 | None | None | N |
T/V | 0.4328 | ambiguous | 0.4172 | ambiguous | -0.348 | Destabilizing | 0.985 | D | 0.478 | neutral | None | None | None | None | N |
T/W | 0.8255 | likely_pathogenic | 0.8247 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | N |
T/Y | 0.4568 | ambiguous | 0.4604 | ambiguous | -0.647 | Destabilizing | 0.999 | D | 0.759 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.