Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30440 | 91543;91544;91545 | chr2:178551213;178551212;178551211 | chr2:179415940;179415939;179415938 |
N2AB | 28799 | 86620;86621;86622 | chr2:178551213;178551212;178551211 | chr2:179415940;179415939;179415938 |
N2A | 27872 | 83839;83840;83841 | chr2:178551213;178551212;178551211 | chr2:179415940;179415939;179415938 |
N2B | 21375 | 64348;64349;64350 | chr2:178551213;178551212;178551211 | chr2:179415940;179415939;179415938 |
Novex-1 | 21500 | 64723;64724;64725 | chr2:178551213;178551212;178551211 | chr2:179415940;179415939;179415938 |
Novex-2 | 21567 | 64924;64925;64926 | chr2:178551213;178551212;178551211 | chr2:179415940;179415939;179415938 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1446052860 | 0.011 | 1.0 | N | 0.709 | 0.437 | 0.478905595755 | gnomAD-4.0.0 | 1.36871E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.0421E-05 | None | 0 | 0 | 0 | 0 | 0 |
T/P | None | None | 1.0 | N | 0.722 | 0.547 | 0.500363902356 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.0248E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2604 | likely_benign | 0.2311 | benign | -1.058 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.51971374 | None | None | N |
T/C | 0.6491 | likely_pathogenic | 0.6226 | pathogenic | -0.903 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/D | 0.8719 | likely_pathogenic | 0.8606 | pathogenic | -1.316 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/E | 0.8309 | likely_pathogenic | 0.8161 | pathogenic | -1.198 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
T/F | 0.6378 | likely_pathogenic | 0.6055 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
T/G | 0.6075 | likely_pathogenic | 0.6276 | pathogenic | -1.415 | Destabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
T/H | 0.5323 | ambiguous | 0.5238 | ambiguous | -1.59 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/I | 0.51 | ambiguous | 0.485 | ambiguous | -0.156 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.511536974 | None | None | N |
T/K | 0.647 | likely_pathogenic | 0.6358 | pathogenic | -0.819 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | N | 0.508574026 | None | None | N |
T/L | 0.3228 | likely_benign | 0.2909 | benign | -0.156 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
T/M | 0.1948 | likely_benign | 0.1812 | benign | -0.044 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
T/N | 0.4299 | ambiguous | 0.3964 | ambiguous | -1.212 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
T/P | 0.9372 | likely_pathogenic | 0.9424 | pathogenic | -0.424 | Destabilizing | 1.0 | D | 0.722 | prob.delet. | N | 0.501909436 | None | None | N |
T/Q | 0.5554 | ambiguous | 0.5368 | ambiguous | -1.207 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
T/R | 0.5881 | likely_pathogenic | 0.5821 | pathogenic | -0.774 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | N | 0.468041103 | None | None | N |
T/S | 0.1898 | likely_benign | 0.1892 | benign | -1.427 | Destabilizing | 0.999 | D | 0.528 | neutral | N | 0.443175754 | None | None | N |
T/V | 0.3521 | ambiguous | 0.3291 | benign | -0.424 | Destabilizing | 0.999 | D | 0.555 | neutral | None | None | None | None | N |
T/W | 0.8804 | likely_pathogenic | 0.8743 | pathogenic | -0.841 | Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
T/Y | 0.6672 | likely_pathogenic | 0.6332 | pathogenic | -0.531 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.