Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30442 | 91549;91550;91551 | chr2:178551207;178551206;178551205 | chr2:179415934;179415933;179415932 |
N2AB | 28801 | 86626;86627;86628 | chr2:178551207;178551206;178551205 | chr2:179415934;179415933;179415932 |
N2A | 27874 | 83845;83846;83847 | chr2:178551207;178551206;178551205 | chr2:179415934;179415933;179415932 |
N2B | 21377 | 64354;64355;64356 | chr2:178551207;178551206;178551205 | chr2:179415934;179415933;179415932 |
Novex-1 | 21502 | 64729;64730;64731 | chr2:178551207;178551206;178551205 | chr2:179415934;179415933;179415932 |
Novex-2 | 21569 | 64930;64931;64932 | chr2:178551207;178551206;178551205 | chr2:179415934;179415933;179415932 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs370086155 | -1.048 | 0.98 | N | 0.545 | 0.463 | None | gnomAD-2.1.1 | 1.43E-05 | None | None | None | None | N | None | 1.65344E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/T | rs370086155 | -1.048 | 0.98 | N | 0.545 | 0.463 | None | gnomAD-3.1.2 | 5.92E-05 | None | None | None | None | N | None | 2.17255E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs370086155 | -1.048 | 0.98 | N | 0.545 | 0.463 | None | gnomAD-4.0.0 | 1.30159E-05 | None | None | None | None | N | None | 2.67094E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60128E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6197 | likely_pathogenic | 0.6628 | pathogenic | -0.888 | Destabilizing | 0.97 | D | 0.491 | neutral | None | None | None | None | N |
K/C | 0.705 | likely_pathogenic | 0.7134 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/D | 0.9344 | likely_pathogenic | 0.9386 | pathogenic | -0.615 | Destabilizing | 0.97 | D | 0.528 | neutral | None | None | None | None | N |
K/E | 0.4856 | ambiguous | 0.5314 | ambiguous | -0.431 | Destabilizing | 0.835 | D | 0.433 | neutral | N | 0.442692964 | None | None | N |
K/F | 0.9029 | likely_pathogenic | 0.907 | pathogenic | -0.222 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | N |
K/G | 0.8133 | likely_pathogenic | 0.8337 | pathogenic | -1.333 | Destabilizing | 0.985 | D | 0.566 | neutral | None | None | None | None | N |
K/H | 0.4414 | ambiguous | 0.4448 | ambiguous | -1.602 | Destabilizing | 0.996 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/I | 0.5246 | ambiguous | 0.5527 | ambiguous | 0.315 | Stabilizing | 0.998 | D | 0.725 | prob.delet. | N | 0.491276345 | None | None | N |
K/L | 0.5346 | ambiguous | 0.5778 | pathogenic | 0.315 | Stabilizing | 0.97 | D | 0.566 | neutral | None | None | None | None | N |
K/M | 0.3595 | ambiguous | 0.3935 | ambiguous | 0.144 | Stabilizing | 0.999 | D | 0.682 | prob.neutral | None | None | None | None | N |
K/N | 0.7969 | likely_pathogenic | 0.8179 | pathogenic | -0.958 | Destabilizing | 0.98 | D | 0.446 | neutral | N | 0.497527526 | None | None | N |
K/P | 0.9905 | likely_pathogenic | 0.9921 | pathogenic | -0.058 | Destabilizing | 0.999 | D | 0.594 | neutral | None | None | None | None | N |
K/Q | 0.1645 | likely_benign | 0.1852 | benign | -0.859 | Destabilizing | 0.489 | N | 0.29 | neutral | N | 0.43388148 | None | None | N |
K/R | 0.0941 | likely_benign | 0.0956 | benign | -0.933 | Destabilizing | 0.961 | D | 0.415 | neutral | N | 0.441519528 | None | None | N |
K/S | 0.6694 | likely_pathogenic | 0.7099 | pathogenic | -1.577 | Destabilizing | 0.97 | D | 0.371 | neutral | None | None | None | None | N |
K/T | 0.3391 | likely_benign | 0.3702 | ambiguous | -1.162 | Destabilizing | 0.98 | D | 0.545 | neutral | N | 0.434534841 | None | None | N |
K/V | 0.472 | ambiguous | 0.5109 | ambiguous | -0.058 | Destabilizing | 0.996 | D | 0.605 | neutral | None | None | None | None | N |
K/W | 0.8793 | likely_pathogenic | 0.8844 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
K/Y | 0.8027 | likely_pathogenic | 0.8096 | pathogenic | 0.125 | Stabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.