Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30452 | 91579;91580;91581 | chr2:178551177;178551176;178551175 | chr2:179415904;179415903;179415902 |
N2AB | 28811 | 86656;86657;86658 | chr2:178551177;178551176;178551175 | chr2:179415904;179415903;179415902 |
N2A | 27884 | 83875;83876;83877 | chr2:178551177;178551176;178551175 | chr2:179415904;179415903;179415902 |
N2B | 21387 | 64384;64385;64386 | chr2:178551177;178551176;178551175 | chr2:179415904;179415903;179415902 |
Novex-1 | 21512 | 64759;64760;64761 | chr2:178551177;178551176;178551175 | chr2:179415904;179415903;179415902 |
Novex-2 | 21579 | 64960;64961;64962 | chr2:178551177;178551176;178551175 | chr2:179415904;179415903;179415902 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.99 | N | 0.705 | 0.312 | 0.32714864917 | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77624E-05 | None | 0 | 0 | 0 | 0 | 0 |
S/R | None | None | 0.99 | N | 0.638 | 0.41 | 0.331365685468 | gnomAD-4.0.0 | 2.73722E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.59824E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1733 | likely_benign | 0.1687 | benign | -0.595 | Destabilizing | 0.559 | D | 0.58 | neutral | None | None | None | None | I |
S/C | 0.1399 | likely_benign | 0.1163 | benign | -0.357 | Destabilizing | 0.032 | N | 0.58 | neutral | N | 0.488502442 | None | None | I |
S/D | 0.9559 | likely_pathogenic | 0.9482 | pathogenic | -0.102 | Destabilizing | 0.993 | D | 0.697 | prob.neutral | None | None | None | None | I |
S/E | 0.9512 | likely_pathogenic | 0.9457 | pathogenic | -0.188 | Destabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | I |
S/F | 0.4983 | ambiguous | 0.5071 | ambiguous | -1.177 | Destabilizing | 0.978 | D | 0.723 | prob.delet. | None | None | None | None | I |
S/G | 0.3128 | likely_benign | 0.2939 | benign | -0.715 | Destabilizing | 0.822 | D | 0.614 | neutral | N | 0.468678851 | None | None | I |
S/H | 0.6922 | likely_pathogenic | 0.678 | pathogenic | -1.269 | Destabilizing | 0.998 | D | 0.634 | neutral | None | None | None | None | I |
S/I | 0.6692 | likely_pathogenic | 0.646 | pathogenic | -0.402 | Destabilizing | 0.942 | D | 0.725 | prob.delet. | N | 0.513733041 | None | None | I |
S/K | 0.9772 | likely_pathogenic | 0.9755 | pathogenic | -0.545 | Destabilizing | 0.978 | D | 0.701 | prob.neutral | None | None | None | None | I |
S/L | 0.3492 | ambiguous | 0.3438 | ambiguous | -0.402 | Destabilizing | 0.754 | D | 0.687 | prob.neutral | None | None | None | None | I |
S/M | 0.4526 | ambiguous | 0.4415 | ambiguous | 0.059 | Stabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | I |
S/N | 0.6019 | likely_pathogenic | 0.5757 | pathogenic | -0.327 | Destabilizing | 0.99 | D | 0.705 | prob.neutral | N | 0.496780875 | None | None | I |
S/P | 0.9823 | likely_pathogenic | 0.9774 | pathogenic | -0.438 | Destabilizing | 0.993 | D | 0.641 | neutral | None | None | None | None | I |
S/Q | 0.8424 | likely_pathogenic | 0.8313 | pathogenic | -0.649 | Destabilizing | 0.993 | D | 0.679 | prob.neutral | None | None | None | None | I |
S/R | 0.955 | likely_pathogenic | 0.9529 | pathogenic | -0.304 | Destabilizing | 0.99 | D | 0.638 | neutral | N | 0.490638355 | None | None | I |
S/T | 0.3533 | ambiguous | 0.3409 | ambiguous | -0.448 | Destabilizing | 0.822 | D | 0.639 | neutral | N | 0.484018991 | None | None | I |
S/V | 0.5613 | ambiguous | 0.5395 | ambiguous | -0.438 | Destabilizing | 0.915 | D | 0.69 | prob.neutral | None | None | None | None | I |
S/W | 0.6682 | likely_pathogenic | 0.6453 | pathogenic | -1.122 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | I |
S/Y | 0.4707 | ambiguous | 0.4522 | ambiguous | -0.863 | Destabilizing | 0.993 | D | 0.717 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.