Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3047 | 9364;9365;9366 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
N2AB | 3047 | 9364;9365;9366 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
N2A | 3047 | 9364;9365;9366 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
N2B | 3001 | 9226;9227;9228 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
Novex-1 | 3001 | 9226;9227;9228 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
Novex-2 | 3001 | 9226;9227;9228 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
Novex-3 | 3047 | 9364;9365;9366 | chr2:178768697;178768696;178768695 | chr2:179633424;179633423;179633422 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs946142615 | -0.406 | 0.044 | N | 0.341 | 0.188 | 0.183819452728 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
S/T | rs946142615 | -0.406 | 0.044 | N | 0.341 | 0.188 | 0.183819452728 | gnomAD-4.0.0 | 8.20963E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07917E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.3233 | likely_benign | 0.2718 | benign | -0.755 | Destabilizing | 0.91 | D | 0.575 | neutral | N | 0.482723168 | None | None | N |
S/C | 0.4827 | ambiguous | 0.4173 | ambiguous | -0.511 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
S/D | 0.9876 | likely_pathogenic | 0.9861 | pathogenic | -0.407 | Destabilizing | 0.985 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/E | 0.9934 | likely_pathogenic | 0.9922 | pathogenic | -0.33 | Destabilizing | 0.985 | D | 0.721 | prob.delet. | None | None | None | None | N |
S/F | 0.9842 | likely_pathogenic | 0.9802 | pathogenic | -0.762 | Destabilizing | 0.999 | D | 0.858 | deleterious | None | None | None | None | N |
S/G | 0.6027 | likely_pathogenic | 0.5063 | ambiguous | -1.089 | Destabilizing | 0.985 | D | 0.715 | prob.delet. | None | None | None | None | N |
S/H | 0.9776 | likely_pathogenic | 0.9765 | pathogenic | -1.515 | Destabilizing | 1.0 | D | 0.786 | deleterious | None | None | None | None | N |
S/I | 0.9654 | likely_pathogenic | 0.9552 | pathogenic | 0.047 | Stabilizing | 0.991 | D | 0.834 | deleterious | None | None | None | None | N |
S/K | 0.9987 | likely_pathogenic | 0.9985 | pathogenic | -0.543 | Destabilizing | 0.97 | D | 0.726 | prob.delet. | None | None | None | None | N |
S/L | 0.8842 | likely_pathogenic | 0.8553 | pathogenic | 0.047 | Stabilizing | 0.961 | D | 0.814 | deleterious | D | 0.535078554 | None | None | N |
S/M | 0.9013 | likely_pathogenic | 0.8799 | pathogenic | 0.183 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
S/N | 0.9137 | likely_pathogenic | 0.8959 | pathogenic | -0.77 | Destabilizing | 0.985 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/P | 0.9972 | likely_pathogenic | 0.9972 | pathogenic | -0.184 | Destabilizing | 0.998 | D | 0.813 | deleterious | D | 0.535257814 | None | None | N |
S/Q | 0.9881 | likely_pathogenic | 0.9852 | pathogenic | -0.738 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | N |
S/R | 0.9974 | likely_pathogenic | 0.9966 | pathogenic | -0.65 | Destabilizing | 0.996 | D | 0.806 | deleterious | None | None | None | None | N |
S/T | 0.1918 | likely_benign | 0.1783 | benign | -0.679 | Destabilizing | 0.044 | N | 0.341 | neutral | N | 0.44450039 | None | None | N |
S/V | 0.8911 | likely_pathogenic | 0.8662 | pathogenic | -0.184 | Destabilizing | 0.97 | D | 0.816 | deleterious | None | None | None | None | N |
S/W | 0.9912 | likely_pathogenic | 0.9898 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
S/Y | 0.9694 | likely_pathogenic | 0.9665 | pathogenic | -0.484 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.