Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30474 | 91645;91646;91647 | chr2:178551111;178551110;178551109 | chr2:179415838;179415837;179415836 |
N2AB | 28833 | 86722;86723;86724 | chr2:178551111;178551110;178551109 | chr2:179415838;179415837;179415836 |
N2A | 27906 | 83941;83942;83943 | chr2:178551111;178551110;178551109 | chr2:179415838;179415837;179415836 |
N2B | 21409 | 64450;64451;64452 | chr2:178551111;178551110;178551109 | chr2:179415838;179415837;179415836 |
Novex-1 | 21534 | 64825;64826;64827 | chr2:178551111;178551110;178551109 | chr2:179415838;179415837;179415836 |
Novex-2 | 21601 | 65026;65027;65028 | chr2:178551111;178551110;178551109 | chr2:179415838;179415837;179415836 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1161044987 | 0.098 | 0.001 | N | 0.211 | 0.089 | 0.215109475489 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
T/I | rs1161044987 | 0.098 | 0.001 | N | 0.211 | 0.089 | 0.215109475489 | gnomAD-4.0.0 | 1.59203E-06 | None | None | None | None | I | None | 5.65931E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0946 | likely_benign | 0.1257 | benign | -0.314 | Destabilizing | 0.055 | N | 0.424 | neutral | N | 0.496354091 | None | None | I |
T/C | 0.5234 | ambiguous | 0.5704 | pathogenic | -0.325 | Destabilizing | 0.909 | D | 0.436 | neutral | None | None | None | None | I |
T/D | 0.6693 | likely_pathogenic | 0.7488 | pathogenic | 0.203 | Stabilizing | 0.396 | N | 0.374 | neutral | None | None | None | None | I |
T/E | 0.5793 | likely_pathogenic | 0.6834 | pathogenic | 0.127 | Stabilizing | 0.396 | N | 0.369 | neutral | None | None | None | None | I |
T/F | 0.4494 | ambiguous | 0.5331 | ambiguous | -0.882 | Destabilizing | 0.567 | D | 0.515 | neutral | None | None | None | None | I |
T/G | 0.249 | likely_benign | 0.3252 | benign | -0.42 | Destabilizing | 0.157 | N | 0.445 | neutral | None | None | None | None | I |
T/H | 0.4043 | ambiguous | 0.4624 | ambiguous | -0.61 | Destabilizing | 0.909 | D | 0.541 | neutral | None | None | None | None | I |
T/I | 0.2615 | likely_benign | 0.3255 | benign | -0.155 | Destabilizing | 0.001 | N | 0.211 | neutral | N | 0.493431216 | None | None | I |
T/K | 0.4537 | ambiguous | 0.5501 | ambiguous | -0.291 | Destabilizing | 0.396 | N | 0.372 | neutral | None | None | None | None | I |
T/L | 0.1439 | likely_benign | 0.1783 | benign | -0.155 | Destabilizing | 0.072 | N | 0.462 | neutral | None | None | None | None | I |
T/M | 0.1185 | likely_benign | 0.1409 | benign | -0.13 | Destabilizing | 0.567 | D | 0.413 | neutral | None | None | None | None | I |
T/N | 0.1794 | likely_benign | 0.2204 | benign | -0.114 | Destabilizing | 0.331 | N | 0.357 | neutral | N | 0.488428041 | None | None | I |
T/P | 0.4516 | ambiguous | 0.5394 | ambiguous | -0.181 | Destabilizing | 0.497 | N | 0.399 | neutral | N | 0.464653153 | None | None | I |
T/Q | 0.3466 | ambiguous | 0.4057 | ambiguous | -0.305 | Destabilizing | 0.567 | D | 0.375 | neutral | None | None | None | None | I |
T/R | 0.3745 | ambiguous | 0.4561 | ambiguous | -0.005 | Destabilizing | 0.567 | D | 0.393 | neutral | None | None | None | None | I |
T/S | 0.1116 | likely_benign | 0.144 | benign | -0.313 | Destabilizing | 0.001 | N | 0.219 | neutral | N | 0.44740535 | None | None | I |
T/V | 0.1811 | likely_benign | 0.2214 | benign | -0.181 | Destabilizing | 0.072 | N | 0.433 | neutral | None | None | None | None | I |
T/W | 0.773 | likely_pathogenic | 0.8098 | pathogenic | -0.925 | Destabilizing | 0.968 | D | 0.616 | neutral | None | None | None | None | I |
T/Y | 0.4889 | ambiguous | 0.5474 | ambiguous | -0.618 | Destabilizing | 0.726 | D | 0.52 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.