Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30477 | 91654;91655;91656 | chr2:178551102;178551101;178551100 | chr2:179415829;179415828;179415827 |
N2AB | 28836 | 86731;86732;86733 | chr2:178551102;178551101;178551100 | chr2:179415829;179415828;179415827 |
N2A | 27909 | 83950;83951;83952 | chr2:178551102;178551101;178551100 | chr2:179415829;179415828;179415827 |
N2B | 21412 | 64459;64460;64461 | chr2:178551102;178551101;178551100 | chr2:179415829;179415828;179415827 |
Novex-1 | 21537 | 64834;64835;64836 | chr2:178551102;178551101;178551100 | chr2:179415829;179415828;179415827 |
Novex-2 | 21604 | 65035;65036;65037 | chr2:178551102;178551101;178551100 | chr2:179415829;179415828;179415827 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/N | None | None | 0.822 | N | 0.482 | 0.139 | 0.255270683199 | gnomAD-4.0.0 | 6.84373E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15974E-05 | 0 |
S/T | rs1699253758 | None | 0.014 | N | 0.199 | 0.092 | 0.183819452728 | gnomAD-4.0.0 | 6.84373E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99593E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0689 | likely_benign | 0.0741 | benign | -0.376 | Destabilizing | 0.559 | D | 0.364 | neutral | None | None | None | None | I |
S/C | 0.1313 | likely_benign | 0.1389 | benign | -0.415 | Destabilizing | 0.014 | N | 0.27 | neutral | N | 0.472978627 | None | None | I |
S/D | 0.5151 | ambiguous | 0.5838 | pathogenic | 0.193 | Stabilizing | 0.86 | D | 0.447 | neutral | None | None | None | None | I |
S/E | 0.5548 | ambiguous | 0.6243 | pathogenic | 0.117 | Stabilizing | 0.86 | D | 0.442 | neutral | None | None | None | None | I |
S/F | 0.2264 | likely_benign | 0.2567 | benign | -0.893 | Destabilizing | 0.978 | D | 0.609 | neutral | None | None | None | None | I |
S/G | 0.0886 | likely_benign | 0.0953 | benign | -0.507 | Destabilizing | 0.822 | D | 0.377 | neutral | N | 0.456798412 | None | None | I |
S/H | 0.3773 | ambiguous | 0.4202 | ambiguous | -0.897 | Destabilizing | 0.998 | D | 0.572 | neutral | None | None | None | None | I |
S/I | 0.1516 | likely_benign | 0.162 | benign | -0.158 | Destabilizing | 0.942 | D | 0.556 | neutral | N | 0.487427963 | None | None | I |
S/K | 0.633 | likely_pathogenic | 0.7066 | pathogenic | -0.525 | Destabilizing | 0.86 | D | 0.445 | neutral | None | None | None | None | I |
S/L | 0.0802 | likely_benign | 0.0848 | benign | -0.158 | Destabilizing | 0.754 | D | 0.493 | neutral | None | None | None | None | I |
S/M | 0.141 | likely_benign | 0.1502 | benign | -0.12 | Destabilizing | 0.994 | D | 0.569 | neutral | None | None | None | None | I |
S/N | 0.1253 | likely_benign | 0.1316 | benign | -0.303 | Destabilizing | 0.822 | D | 0.482 | neutral | N | 0.442887752 | None | None | I |
S/P | 0.0918 | likely_benign | 0.1013 | benign | -0.2 | Destabilizing | 0.978 | D | 0.567 | neutral | None | None | None | None | I |
S/Q | 0.4233 | ambiguous | 0.4809 | ambiguous | -0.495 | Destabilizing | 0.978 | D | 0.515 | neutral | None | None | None | None | I |
S/R | 0.62 | likely_pathogenic | 0.6939 | pathogenic | -0.309 | Destabilizing | 0.942 | D | 0.573 | neutral | N | 0.461145439 | None | None | I |
S/T | 0.0666 | likely_benign | 0.0681 | benign | -0.386 | Destabilizing | 0.014 | N | 0.199 | neutral | N | 0.405788014 | None | None | I |
S/V | 0.1459 | likely_benign | 0.159 | benign | -0.2 | Destabilizing | 0.754 | D | 0.524 | neutral | None | None | None | None | I |
S/W | 0.4073 | ambiguous | 0.4635 | ambiguous | -0.917 | Destabilizing | 0.998 | D | 0.674 | neutral | None | None | None | None | I |
S/Y | 0.2393 | likely_benign | 0.2712 | benign | -0.629 | Destabilizing | 0.993 | D | 0.616 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.