Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30478 | 91657;91658;91659 | chr2:178551099;178551098;178551097 | chr2:179415826;179415825;179415824 |
N2AB | 28837 | 86734;86735;86736 | chr2:178551099;178551098;178551097 | chr2:179415826;179415825;179415824 |
N2A | 27910 | 83953;83954;83955 | chr2:178551099;178551098;178551097 | chr2:179415826;179415825;179415824 |
N2B | 21413 | 64462;64463;64464 | chr2:178551099;178551098;178551097 | chr2:179415826;179415825;179415824 |
Novex-1 | 21538 | 64837;64838;64839 | chr2:178551099;178551098;178551097 | chr2:179415826;179415825;179415824 |
Novex-2 | 21605 | 65038;65039;65040 | chr2:178551099;178551098;178551097 | chr2:179415826;179415825;179415824 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs373900294 | -0.411 | 0.016 | N | 0.227 | 0.032 | 0.141422826196 | gnomAD-2.1.1 | 2.51E-05 | None | None | None | None | I | None | 2.48283E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.41004E-04 |
E/D | rs373900294 | -0.411 | 0.016 | N | 0.227 | 0.032 | 0.141422826196 | gnomAD-3.1.2 | 1.05168E-04 | None | None | None | None | I | None | 2.65508E-04 | 2.6202E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.77555E-04 |
E/D | rs373900294 | -0.411 | 0.016 | N | 0.227 | 0.032 | 0.141422826196 | gnomAD-4.0.0 | 1.42561E-05 | None | None | None | None | I | None | 2.27018E-04 | 8.33806E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60133E-05 |
E/V | rs794729531 | 0.288 | 0.973 | N | 0.765 | 0.473 | 0.481246930725 | gnomAD-2.1.1 | 2.02E-05 | None | None | None | None | I | None | 0 | 1.45307E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
E/V | rs794729531 | 0.288 | 0.973 | N | 0.765 | 0.473 | 0.481246930725 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | I | None | 0 | 1.31079E-04 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/V | rs794729531 | 0.288 | 0.973 | N | 0.765 | 0.473 | 0.481246930725 | gnomAD-4.0.0 | 1.02532E-05 | None | None | None | None | I | None | 0 | 1.35653E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.186 | likely_benign | 0.231 | benign | -0.124 | Destabilizing | 0.834 | D | 0.677 | prob.neutral | N | 0.449832367 | None | None | I |
E/C | 0.8681 | likely_pathogenic | 0.893 | pathogenic | -0.202 | Destabilizing | 0.998 | D | 0.74 | deleterious | None | None | None | None | I |
E/D | 0.0865 | likely_benign | 0.091 | benign | -0.36 | Destabilizing | 0.016 | N | 0.227 | neutral | N | 0.394536445 | None | None | I |
E/F | 0.8209 | likely_pathogenic | 0.8615 | pathogenic | 0.09 | Stabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | I |
E/G | 0.2287 | likely_benign | 0.2579 | benign | -0.321 | Destabilizing | 0.946 | D | 0.685 | prob.neutral | N | 0.469303562 | None | None | I |
E/H | 0.5593 | ambiguous | 0.6261 | pathogenic | 0.549 | Stabilizing | 0.998 | D | 0.714 | prob.delet. | None | None | None | None | I |
E/I | 0.4514 | ambiguous | 0.5348 | ambiguous | 0.359 | Stabilizing | 0.979 | D | 0.779 | deleterious | None | None | None | None | I |
E/K | 0.316 | likely_benign | 0.3721 | ambiguous | 0.393 | Stabilizing | 0.834 | D | 0.601 | neutral | N | 0.462145516 | None | None | I |
E/L | 0.5104 | ambiguous | 0.5938 | pathogenic | 0.359 | Stabilizing | 0.979 | D | 0.779 | deleterious | None | None | None | None | I |
E/M | 0.5765 | likely_pathogenic | 0.6553 | pathogenic | 0.168 | Stabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/N | 0.2326 | likely_benign | 0.272 | benign | -0.043 | Destabilizing | 0.921 | D | 0.73 | prob.delet. | None | None | None | None | I |
E/P | 0.8762 | likely_pathogenic | 0.9052 | pathogenic | 0.219 | Stabilizing | 0.979 | D | 0.794 | deleterious | None | None | None | None | I |
E/Q | 0.211 | likely_benign | 0.2436 | benign | 0.02 | Stabilizing | 0.946 | D | 0.662 | neutral | N | 0.458894567 | None | None | I |
E/R | 0.4757 | ambiguous | 0.5336 | ambiguous | 0.711 | Stabilizing | 0.979 | D | 0.74 | deleterious | None | None | None | None | I |
E/S | 0.1981 | likely_benign | 0.2342 | benign | -0.179 | Destabilizing | 0.769 | D | 0.638 | neutral | None | None | None | None | I |
E/T | 0.2428 | likely_benign | 0.2897 | benign | -0.008 | Destabilizing | 0.959 | D | 0.751 | deleterious | None | None | None | None | I |
E/V | 0.2853 | likely_benign | 0.3555 | ambiguous | 0.219 | Stabilizing | 0.973 | D | 0.765 | deleterious | N | 0.454662184 | None | None | I |
E/W | 0.9483 | likely_pathogenic | 0.9633 | pathogenic | 0.227 | Stabilizing | 0.998 | D | 0.745 | deleterious | None | None | None | None | I |
E/Y | 0.6998 | likely_pathogenic | 0.7566 | pathogenic | 0.34 | Stabilizing | 0.998 | D | 0.75 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.