Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 30486 | 91681;91682;91683 | chr2:178551075;178551074;178551073 | chr2:179415802;179415801;179415800 |
N2AB | 28845 | 86758;86759;86760 | chr2:178551075;178551074;178551073 | chr2:179415802;179415801;179415800 |
N2A | 27918 | 83977;83978;83979 | chr2:178551075;178551074;178551073 | chr2:179415802;179415801;179415800 |
N2B | 21421 | 64486;64487;64488 | chr2:178551075;178551074;178551073 | chr2:179415802;179415801;179415800 |
Novex-1 | 21546 | 64861;64862;64863 | chr2:178551075;178551074;178551073 | chr2:179415802;179415801;179415800 |
Novex-2 | 21613 | 65062;65063;65064 | chr2:178551075;178551074;178551073 | chr2:179415802;179415801;179415800 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/H | None | None | 1.0 | D | 0.797 | 0.863 | 0.953830594898 | gnomAD-4.0.0 | 1.59225E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85958E-06 | 0 | 0 |
L/V | None | None | 0.999 | D | 0.843 | 0.696 | 0.844428606866 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9548 | likely_pathogenic | 0.9696 | pathogenic | -2.509 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
L/C | 0.8997 | likely_pathogenic | 0.9302 | pathogenic | -2.041 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
L/D | 0.9992 | likely_pathogenic | 0.9995 | pathogenic | -2.088 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
L/E | 0.9956 | likely_pathogenic | 0.9972 | pathogenic | -1.955 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/F | 0.751 | likely_pathogenic | 0.8287 | pathogenic | -1.737 | Destabilizing | 1.0 | D | 0.856 | deleterious | D | 0.634330508 | None | None | N |
L/G | 0.991 | likely_pathogenic | 0.9942 | pathogenic | -2.981 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/H | 0.9848 | likely_pathogenic | 0.9909 | pathogenic | -2.154 | Highly Destabilizing | 1.0 | D | 0.797 | deleterious | D | 0.667176447 | None | None | N |
L/I | 0.338 | likely_benign | 0.3865 | ambiguous | -1.193 | Destabilizing | 0.999 | D | 0.832 | deleterious | D | 0.620320266 | None | None | N |
L/K | 0.9906 | likely_pathogenic | 0.9938 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
L/M | 0.431 | ambiguous | 0.5072 | ambiguous | -1.122 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
L/N | 0.9897 | likely_pathogenic | 0.9931 | pathogenic | -1.85 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
L/P | 0.9936 | likely_pathogenic | 0.9962 | pathogenic | -1.607 | Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.667176447 | None | None | N |
L/Q | 0.977 | likely_pathogenic | 0.9864 | pathogenic | -1.88 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
L/R | 0.9811 | likely_pathogenic | 0.9882 | pathogenic | -1.275 | Destabilizing | 1.0 | D | 0.829 | deleterious | D | 0.651157086 | None | None | N |
L/S | 0.992 | likely_pathogenic | 0.9956 | pathogenic | -2.671 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
L/T | 0.9641 | likely_pathogenic | 0.9751 | pathogenic | -2.391 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/V | 0.4524 | ambiguous | 0.52 | ambiguous | -1.607 | Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.583748974 | None | None | N |
L/W | 0.9799 | likely_pathogenic | 0.9897 | pathogenic | -1.88 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
L/Y | 0.9737 | likely_pathogenic | 0.9846 | pathogenic | -1.655 | Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.